{"id":"W4285401886","doi":"10.1016/j.virusres.2022.198869","title":"A one-tube rapid visual CRISPR assay for the field detection of Japanese encephalitis virus","year":2022,"lang":"en","type":"article","venue":"Virus Research","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Japanese encephalitis; CRISPR; Biology; Virology; Reverse Transcription Loop-mediated Isothermal Amplification; Loop-mediated isothermal amplification; Virus; RNA; Enterovirus 71; Enterovirus; Molecular biology; Encephalitis; Computational biology; Reverse transcriptase; Gene; Genetics; DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00215991,0.0001031788,0.0002476948,0.0002010926,0.0005642164,0.00003420686,0.0002824891,0.00006271007,0.002225185],"category_scores_gemma":[0.001457993,0.00008223598,0.0002187399,0.0005260883,0.0001059408,0.00005122227,0.0002047625,0.0005254868,0.00002178033],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001036317,"about_ca_system_score_gemma":0.0002092758,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004759145,"about_ca_topic_score_gemma":0.0003391035,"domain_scores_codex":[0.9973332,0.000459179,0.0002775799,0.0003180721,0.001141874,0.0004701362],"domain_scores_gemma":[0.9968414,0.00215511,0.00005756836,0.000463563,0.0003343828,0.000147928],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.006193597,0.0008512882,0.0001757514,0.0002062277,0.0002501238,0.00002328584,0.00106641,0.00001654418,0.4870082,0.000285712,0.007963664,0.4959592],"study_design_scores_gemma":[0.01114023,0.01984246,0.0176036,0.000127369,0.0005971274,0.00005177362,0.01614055,0.03057986,0.5026828,0.0009601093,0.3996737,0.0006003996],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9654845,0.01284692,0.001978995,0.009654942,0.0006500465,0.004956197,0.0004038086,0.0001000713,0.003924494],"genre_scores_gemma":[0.9954985,0.0002603519,0.00001280187,0.0008094932,0.0003490401,0.001378552,0.00001556077,0.00002564797,0.00164999],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4953588,"threshold_uncertainty_score":0.9986869,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06206081967618603,"score_gpt":0.4101782509155684,"score_spread":0.3481174312393824,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}