{"id":"W4285480942","doi":"10.5281/zenodo.4604835","title":"Transcriptome analysis reveals high tumor heterogeneity with respect to re-activation of stemness and proliferation programs","year":2021,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Optech (Canada)","funders":"","keywords":"Transcriptome; Cancer research; Computational biology; Cell biology; Biology; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004538707,0.000306624,0.0004627829,0.0009458385,0.0004335559,0.0007266163,0.0002537329,0.0003618433,0.01881869],"category_scores_gemma":[0.0009756255,0.0001553121,0.0004455587,0.001434457,0.0001902509,0.0002994738,0.0003857182,0.0005363958,0.003552713],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003054223,"about_ca_system_score_gemma":0.0004010667,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001655656,"about_ca_topic_score_gemma":0.002163613,"domain_scores_codex":[0.9996114,0.00004308255,0.00002832523,0.0001497169,0.0001028515,0.00006455372],"domain_scores_gemma":[0.999231,0.0004304084,0.00008536431,0.00009684562,0.00009561644,0.00006074934],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001190802,0.0001185848,0.03149081,0.001235405,0.000328296,0.000588016,0.0003041803,0.004776485,0.8482392,0.002371225,0.07038825,0.03896871],"study_design_scores_gemma":[0.0001583231,0.0003444534,0.5220718,0.0001798709,0.0003260373,0.001462145,0.0005178709,0.03805371,0.2960583,0.005324464,0.1353292,0.0001738159],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.3259764,0.001029303,0.03778964,0.0006347369,0.0003070274,0.00006906665,0.6260574,0.003641775,0.00449454],"genre_scores_gemma":[0.4742372,0.0008690708,0.03685996,0.0005865223,0.0001200529,0.0003986905,0.4806508,0.001326444,0.004951133],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01881869,"threshold_uncertainty_score":0.06295472,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02335076646222137,"score_gpt":0.2472806616363245,"score_spread":0.2239298951741031,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}