{"id":"W4285733805","doi":"10.1093/hmg/ddac158","title":"Detailed stratified GWAS analysis for severe COVID-19 in four European populations","year":2022,"lang":"en","type":"review","venue":"Human Molecular Genetics","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Berrikuntza + Ikerketa + Osasuna Eusko Fundazioa; Agencia Estatal de Investigación; Instituto de Salud Carlos III; Agència de Gestió d'Ajuts Universitaris i de Recerca; Junta de Andalucía; Deutsches Zentrum für Lungenforschung; Universität des Saarlandes; Novo Nordisk Fonden; Norges Forskningsråd; Ministero dell’Istruzione, dell’Università e della Ricerca; European Regional Development Fund; Bundesministerium für Bildung und Forschung; Generalitat de Catalunya; “la Caixa” Foundation; Ministerio de Economía y Competitividad; Fondazione Cariplo; Stiftung Universitätsmedizin Essen; Eusko Jaurlaritza; Centres de Recerca de Catalunya; Dipartimenti di Eccellenza; Deutsche Forschungsgemeinschaft; Universität zu Köln; European Commission; Technische Universität München; EU Joint Programme – Neurodegenerative Disease Research; Deutsches Zentrum für Infektionsforschung","keywords":"Biology; Coronavirus disease 2019 (COVID-19); Genome-wide association study; 2019-20 coronavirus outbreak; Pandemic; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Computational biology; Genetics; Outbreak; Disease; Single-nucleotide polymorphism; Infectious disease (medical specialty); Genotype; Internal medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002198278,0.000412492,0.001327957,0.0005910041,0.0001906701,0.00004964678,0.0002133343,0.0001090559,0.0008113991],"category_scores_gemma":[0.00007177988,0.000387294,0.001371012,0.0006927761,0.00002966012,0.00001091802,0.0001077192,0.0002082684,0.00001778958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005024329,"about_ca_system_score_gemma":0.0004986973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002481937,"about_ca_topic_score_gemma":0.0002593546,"domain_scores_codex":[0.9976028,0.00044343,0.0006955649,0.0006279439,0.0003380588,0.0002922412],"domain_scores_gemma":[0.9984354,0.0000890528,0.0002746188,0.0007992542,0.00004359978,0.0003580213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001567323,0.007569353,0.1001824,0.07056472,0.057534,0.01931069,0.001179325,0.01542244,0.00002203115,0.008558652,0.005640527,0.7138591],"study_design_scores_gemma":[0.002193385,0.0003467244,0.02747665,0.0006119553,0.05539532,0.00003456909,0.00003491488,0.0000793929,7.341253e-7,0.0003664918,0.9127892,0.0006707071],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002120239,0.9929186,0.0007017847,0.00004066422,0.00005462476,0.00280546,0.0004560786,0.00004618878,0.0008563744],"genre_scores_gemma":[0.01042889,0.9777989,0.001252243,0.0004104865,0.00007961368,0.0008936968,0.008701636,0.0001362688,0.0002983023],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9071487,"threshold_uncertainty_score":0.9998579,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2176108405584023,"score_gpt":0.4123388902207035,"score_spread":0.1947280496623012,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}