{"id":"W4285803070","doi":"10.1139/gen-2022-0003","title":"Genome-wide investigation and expression analysis of the AP2/ERF family for selection of agarwood-related genes in <i>Aquilaria sinensis</i> (Lour.) Gilg","year":2022,"lang":"en","type":"article","venue":"Genome","topic":"Wood and Agarwood Research","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Key Research and Development Program of China","keywords":"Agarwood; Biology; Methyl jasmonate; Gene; Genome; Genetics; Gene family; Subfamily","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000433103,0.0001348911,0.0003302769,0.0002822981,0.000201096,0.00001439789,0.0002447457,0.00009439866,0.0002032791],"category_scores_gemma":[0.00007005282,0.0001130185,0.0001575725,0.00135167,0.00009162289,0.00005588417,0.0002406831,0.0002380014,3.872493e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008697623,"about_ca_system_score_gemma":0.00009646692,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008204922,"about_ca_topic_score_gemma":0.00003234945,"domain_scores_codex":[0.998521,0.0001066784,0.0004621259,0.0003137174,0.0003559062,0.0002405561],"domain_scores_gemma":[0.9991568,0.0001356632,0.0002599922,0.0002823311,0.0001085551,0.00005668937],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004539866,0.00005711931,0.02935302,0.0001090201,0.0001985448,6.423542e-7,0.0005913713,0.006274046,0.9631699,0.00001243637,0.00005676617,0.0001316814],"study_design_scores_gemma":[0.001517696,0.0001208581,0.2979126,0.00004345553,0.0005091047,0.000003514391,0.001091413,0.004247351,0.6882556,0.0005229644,0.005462874,0.0003125816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971942,0.001837958,0.00002817471,0.0002354001,0.00003637619,0.0002223206,0.0001197294,0.0000168898,0.0003089893],"genre_scores_gemma":[0.9986128,0.00007692257,0.0001433287,0.00007500697,0.0000311142,0.00006398803,0.0001716348,0.00002043347,0.000804836],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2749144,"threshold_uncertainty_score":0.460876,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01515170760273131,"score_gpt":0.2290812274577222,"score_spread":0.2139295198549909,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}