{"id":"W4286005501","doi":"10.1094/pdis-05-22-1209-re","title":"Genome-Wide Association Mapping in Sunflower (<i>Helianthus annuus</i>) Reveals Common Loci and Putative Candidate Genes for Resistance to <i>Diaporthe gulyae</i> and <i>D. helianthi</i> Causing Phomopsis Stem Canker","year":2022,"lang":"en","type":"article","venue":"Plant Disease","topic":"Sunflower and Safflower Cultivation","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Helianthus annuus; Canker; Phomopsis; Pathosystem; Sunflower; Quantitative trait locus; Candidate gene; Plant disease resistance; Blight; Genetics; Inoculation; Botany; Horticulture; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006398823,0.0002090726,0.0002935852,0.00005101152,0.0006020439,0.0001102022,0.0001106676,0.0000489243,0.000024919],"category_scores_gemma":[0.0001443442,0.0001220136,0.00005812336,0.0004589999,0.00002617316,0.0001770158,0.000123197,0.0001239772,0.000001412222],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002274101,"about_ca_system_score_gemma":0.00002760103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004888259,"about_ca_topic_score_gemma":0.003091553,"domain_scores_codex":[0.9982107,0.0001819836,0.0003539967,0.0005085571,0.0003217482,0.0004230267],"domain_scores_gemma":[0.9989385,0.0004785309,0.0001744221,0.00007160933,0.00007797503,0.0002589537],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006832745,0.000127058,0.9555177,0.00008266188,0.00003927586,0.000116305,0.002337175,0.0002134849,0.03428736,0.00001722899,0.003350702,0.003227754],"study_design_scores_gemma":[0.0005819882,0.00007569115,0.9338103,0.00006518448,0.0000506817,0.000004171211,0.001829554,0.0002806273,0.0003997736,0.0002863204,0.06214132,0.0004744125],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9875074,0.001729067,0.00001844459,0.003396138,0.0001619359,0.0008297879,0.006272305,0.0000425584,0.00004234535],"genre_scores_gemma":[0.9953667,0.0002301236,0.00007296506,0.002386438,0.00009810807,0.0002753564,0.0009885945,0.000004725037,0.0005769859],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05879062,"threshold_uncertainty_score":0.4975572,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01550096673965516,"score_gpt":0.2130594887136522,"score_spread":0.1975585219739971,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}