{"id":"W4286484966","doi":"10.3201/eid2808.220464","title":"Increasing and More Commonly Refractory <i>Mycobacterium avium</i> Pulmonary Disease, Toronto, Ontario, Canada","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"West Park Healthcare Centre; Toronto Western Hospital; University of Toronto; University Health Network","funders":"","keywords":"Sputum; Mycobacterium avium complex; Culture conversion; Medicine; Internal medicine; Mycobacterium avium-intracellulare infection; Nontuberculous mycobacteria; Retrospective cohort study; Sputum culture; Pulmonary disease; Mycobacterium; Cohort study; Tuberculosis; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002818875,0.0003104545,0.0003219067,0.0007981071,0.001928937,0.001098284,0.0006735813,0.0002778283,0.00391775],"category_scores_gemma":[0.00142685,0.0002678332,0.0004337545,0.002280948,0.0005537386,0.000359181,0.0005415109,0.000525433,0.0002222851],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01588969,"about_ca_system_score_gemma":0.01708107,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9694956,"about_ca_topic_score_gemma":0.987171,"domain_scores_codex":[0.9993294,0.00004632047,0.00005045024,0.0001279279,0.000183007,0.0002630139],"domain_scores_gemma":[0.9981875,0.00007701905,0.0006266141,0.0000624028,0.0004883041,0.000558079],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008603794,0.00001346675,0.9936341,0.00007588175,0.00003425243,0.0003479337,0.000469814,0.00005954277,0.0005753515,0.0000710875,0.00153274,0.003099798],"study_design_scores_gemma":[0.000005692139,0.00002261735,0.9977378,0.00003622389,0.00001844461,0.0003023646,0.000670097,0.00006813993,0.00006799749,0.00001254841,0.001053246,0.000004880422],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985186,0.002617012,0.0002027621,0.0006879871,0.00004653591,0.00006850453,0.005836031,0.00002394764,0.005331193],"genre_scores_gemma":[0.9964893,0.0007308301,0.0001211358,0.0002471161,0.00002458363,0.00001227248,0.001151616,0.000006793803,0.001216395],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03050441,"threshold_uncertainty_score":0.1152884,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00694333183601669,"score_gpt":0.2400312355504121,"score_spread":0.2330879037143954,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}