{"id":"W4286750103","doi":"10.1038/s41597-022-01544-7","title":"Single-cell RNA-seq of primary bone marrow neutrophils from female and male adult mice","year":2022,"lang":"en","type":"article","venue":"Scientific Data","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute on Aging; Rose Hills Foundation; Buck Institute for Research on Aging; Echo Foundation; McGill University; National Institutes of Health; Pew Charitable Trusts; U.S. Department of Health and Human Services","keywords":"Biology; Transcriptome; Innate immune system; Immune system; Sexual dimorphism; Bone marrow; Immunology; Cell; Cell type; RNA; Phenotype; Cell biology; Gene expression; Gene; Genetics; Endocrinology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002405961,0.0002610183,0.0003794538,0.0003298259,0.0003686394,0.0003385798,0.0002553921,0.0003527405,0.001867109],"category_scores_gemma":[0.0002696655,0.0001597661,0.0003510468,0.0002818252,0.0002372966,0.0001262251,0.0002965618,0.0006083089,0.0008106577],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001656659,"about_ca_system_score_gemma":0.0002936216,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001128314,"about_ca_topic_score_gemma":0.004072502,"domain_scores_codex":[0.9997745,0.00001067919,0.00001071195,0.0001204577,0.0000575599,0.00002605872],"domain_scores_gemma":[0.9998654,0.000034698,0.00002038223,0.00001697703,0.0000395956,0.00002296525],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001895938,0.00001313941,0.003103237,0.0001913304,0.00005013756,0.00008699629,0.00006739087,0.0004366623,0.9848839,0.0002914548,0.001141923,0.009544095],"study_design_scores_gemma":[0.00009344768,0.0004031709,0.2165816,0.0001720708,0.0002982489,0.001051293,0.0003339411,0.01031485,0.6908483,0.002669357,0.07713807,0.00009565279],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"dataset","genre_scores_codex":[0.7158477,0.004688049,0.08408518,0.0004013215,0.0003613005,0.0002391296,0.1836564,0.00142925,0.009291676],"genre_scores_gemma":[0.7577002,0.003331524,0.09316473,0.001672172,0.0001148423,0.001007278,0.1287495,0.001588017,0.01267178],"genre_candidate":"dataset","genre_consensus":null,"teacher_disagreement_score":0.001867109,"threshold_uncertainty_score":0.00624615,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02932911877035047,"score_gpt":0.2177376773973617,"score_spread":0.1884085586270113,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}