{"id":"W4287881286","doi":"10.1016/j.ygeno.2022.110440","title":"Chromosomal-level reference genome of the moth Heortia vitessoides (Lepidoptera: Crambidae), a major pest of agarwood-producing trees","year":2022,"lang":"en","type":"article","venue":"Genomics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University; University of Toronto","funders":"Biotechnology and Biological Sciences Research Council; Chinese University of Hong Kong","keywords":"Biology; Genome; Retrotransposon; Genetics; Transposable element; Gene; Agarwood; Genome size; Reference genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002587008,0.0001907513,0.0002908606,0.00004122683,0.0002479684,0.00001041289,0.0005744518,0.0000615321,0.00004290835],"category_scores_gemma":[0.00005560286,0.0001524164,0.0001567895,0.0001222439,0.000165735,0.000001006102,0.0009032164,0.0001243329,0.000001392012],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003503653,"about_ca_system_score_gemma":0.0001752086,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001401298,"about_ca_topic_score_gemma":0.0001853735,"domain_scores_codex":[0.9986629,0.00008533962,0.0004190679,0.0004108004,0.000155917,0.0002659905],"domain_scores_gemma":[0.9987847,0.00001978443,0.000317298,0.0007287721,0.0001063252,0.00004308637],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005151924,0.00007655843,0.01158021,0.00003360544,0.000135607,8.108132e-7,0.0005038907,0.001889033,0.9845765,0.0001865761,0.00005375031,0.000911958],"study_design_scores_gemma":[0.0008608419,0.0005290376,0.3038579,0.00001407795,0.0001235035,0.00002342815,0.0007921274,0.00007156259,0.6622429,0.0006590288,0.03036631,0.000459322],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995712,0.002390499,0.00005202848,0.0001447865,0.0002418255,0.0002603524,0.0004070824,0.000002734942,0.0007886661],"genre_scores_gemma":[0.9976932,0.0002874987,0.0008932818,0.0001392292,0.0001309876,0.00003850543,0.00004506225,0.00003018597,0.0007419937],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3223336,"threshold_uncertainty_score":0.6215361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01984890186628455,"score_gpt":0.2194011439489862,"score_spread":0.1995522420827017,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}