{"id":"W4288766334","doi":"10.26443/msurj.v17i1.173","title":"Genome Annotation of Novel K1 Subcluster Mycobacteriophage Blizzard","year":2022,"lang":"en","type":"article","venue":"McGill Science Undergraduate Research Journal","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"McGill University","keywords":"Genome; Biology; Genetics; Gene; GenBank; Computational biology; Annotation; Genome project","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002302712,0.0007616324,0.0008123248,0.001629461,0.0008254086,0.00101011,0.0003333751,0.0007001684,0.001237485],"category_scores_gemma":[0.0005875962,0.0002556077,0.0007618052,0.001739383,0.0001965181,0.0003711173,0.0005827164,0.0008999483,0.0009733123],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005844276,"about_ca_system_score_gemma":0.0009947399,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006908894,"about_ca_topic_score_gemma":0.005512538,"domain_scores_codex":[0.9997218,0.00001949304,0.00002719447,0.0000937294,0.00008850946,0.00004924945],"domain_scores_gemma":[0.9997073,0.00005980898,0.00007346779,0.00002461705,0.00006259528,0.00007229623],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007849665,0.0001041372,0.004855237,0.0002962358,0.00002125569,0.0006899443,0.0004072504,0.0002711941,0.9775829,0.000106828,0.0002985674,0.01458142],"study_design_scores_gemma":[0.0001712848,0.001334927,0.434319,0.000331605,0.0004957822,0.006471009,0.001811624,0.007180345,0.4896524,0.0004575361,0.05756347,0.0002110678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9799997,0.001461832,0.00502203,0.0002607852,0.00006219294,0.0001853854,0.0109217,0.0004879331,0.001598519],"genre_scores_gemma":[0.8481278,0.002595225,0.05920951,0.0002021257,0.00005363679,0.0002311405,0.08130721,0.0004508259,0.007822362],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006908894,"threshold_uncertainty_score":0.01373738,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05452330493575367,"score_gpt":0.3406911165640371,"score_spread":0.2861678116282834,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}