{"id":"W4289262056","doi":"10.1073/pnas.2114799119","title":"Sulfur and methane oxidation by a single microorganism","year":2022,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"HORIZON EUROPE Marie Sklodowska-Curie Actions; National Research Foundation of Korea; Rural Development Administration; Austrian Science Fund; Natural Sciences and Engineering Research Council of Canada; European Commission; Government of Canada","keywords":"Methanotroph; Anaerobic oxidation of methane; Sulfur; Methane; Thiosulfate; Chemistry; Environmental chemistry; Anoxic waters; Methane monooxygenase; Archaea; Bacteria; Biodegradation; Microorganism; Biochemistry; Organic chemistry; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005525901,0.00004207675,0.00005573481,0.00003846394,0.0001344437,0.000006057659,0.0002097586,0.00003021639,0.00001413351],"category_scores_gemma":[0.0001248681,0.00003292394,0.00002239036,0.0001997397,0.0001796325,0.00001194665,0.0001647342,0.00005064447,1.537532e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006666104,"about_ca_system_score_gemma":0.00001225508,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004181406,"about_ca_topic_score_gemma":2.907922e-8,"domain_scores_codex":[0.9994042,0.000006688772,0.0001166059,0.0001434474,0.0002660433,0.00006302858],"domain_scores_gemma":[0.9997584,0.000006987561,0.0001542916,0.000004192328,0.00006336553,0.00001279556],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001180148,0.00002143272,0.0002544865,0.000008031336,0.000004505746,2.979345e-10,0.00002856049,0.000005976123,0.9901364,0.0008759924,0.008496301,0.0001564881],"study_design_scores_gemma":[0.0001063509,0.00006325916,0.001767631,0.000002656249,0.000005651216,0.000008168564,0.00009048924,0.000007260611,0.983852,0.001506954,0.01255162,0.00003799173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979579,0.000492273,0.00000287684,0.0009480008,0.00002206089,0.00006382212,0.00003602499,0.00000196628,0.0004750096],"genre_scores_gemma":[0.9988794,0.00003016506,0.0003756467,0.0003241056,0.00004549749,0.000004609402,0.000001480129,0.000002373393,0.0003367699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006284457,"threshold_uncertainty_score":0.1342599,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01842779617773705,"score_gpt":0.2474973224235538,"score_spread":0.2290695262458168,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}