{"id":"W4289520811","doi":"10.1099/ijsem.0.005457","title":"Pseudovibrio flavus sp. nov. isolated from the sea sponge Verongula gigantea","year":2022,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Nautilus Biosciences (Canada); University of Prince Edward Island","funders":"","keywords":"Biology; 16S ribosomal RNA; Phylogenetic tree; Alphaproteobacteria; Botany; genomic DNA; Genus; Strain (injury); Ribosomal RNA; Clade; Monophyly; Gene; Microbiology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000268554,0.001303931,0.0005303037,0.0008999886,0.0005437412,0.0006799271,0.0003867134,0.0006603166,0.0006403838],"category_scores_gemma":[0.0005938677,0.0003294032,0.0004886891,0.001373616,0.0002825061,0.0005582242,0.0006999022,0.0002813498,0.0007954055],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003194599,"about_ca_system_score_gemma":0.0004573534,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009075293,"about_ca_topic_score_gemma":0.006166598,"domain_scores_codex":[0.9996163,0.00002768964,0.00007790841,0.000144353,0.0000718643,0.00006184647],"domain_scores_gemma":[0.9994903,0.00006896603,0.0001823933,0.0000558325,0.0001290496,0.00007350026],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001254526,0.0003857086,0.1436607,0.0009639902,0.0001582322,0.007242104,0.001651029,0.00117481,0.8080654,0.000335426,0.0009712299,0.03413681],"study_design_scores_gemma":[0.0002318906,0.002110451,0.852825,0.0003762581,0.0006491332,0.01612442,0.004532625,0.004061027,0.09169307,0.0004987737,0.02678519,0.0001121277],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920369,0.001268998,0.0008998555,0.0001851775,0.0001220567,0.0001503488,0.002842354,0.00003470481,0.002459527],"genre_scores_gemma":[0.9865636,0.001300428,0.003759555,0.0002664501,0.00007956752,0.0002109702,0.005435344,0.0000176365,0.002366365],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009075293,"threshold_uncertainty_score":0.01804495,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009138743961964247,"score_gpt":0.2157411450712985,"score_spread":0.2066024011093342,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}