{"id":"W4289523825","doi":"10.3389/fvets.2022.948448","title":"Characterization of colonization kinetics and virulence potential of Salmonella Enteritidis in chickens by photonic detection","year":2022,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Innovation Saskatchewan; Chicken Farmers of Saskatchewan; Alberta Agriculture and Forestry; Ministry of Agriculture - Saskatchewan","keywords":"Biology; Virulence; Microbiology; Salmonella enteritidis; Salmonella; Cecum; Operon; Yolk; Colonization; Mutant; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003892256,0.00005418424,0.000104826,0.00009771987,0.0001063191,0.00001355313,0.0002005519,0.00002414552,0.00005181557],"category_scores_gemma":[0.0000270061,0.00003372152,0.00001317558,0.001145965,0.0002662062,0.0001458922,0.0001410704,0.00008393572,1.05914e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005567101,"about_ca_system_score_gemma":0.00001649406,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001419101,"about_ca_topic_score_gemma":0.00001612348,"domain_scores_codex":[0.9990962,0.00009811546,0.0001830177,0.0001886932,0.0002695598,0.0001643758],"domain_scores_gemma":[0.9998034,0.00001652915,0.00008232169,0.00003467487,0.00003525446,0.00002782063],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009177779,0.00007193194,0.01969366,0.00001022421,5.099551e-7,0.000003493826,0.0001222243,0.00002662334,0.9725182,0.000003917353,0.000001962499,0.007455445],"study_design_scores_gemma":[0.0001588496,0.002228415,0.8508332,0.00001919827,0.000001618671,0.00002299013,0.0003164859,0.01104978,0.1350288,0.00009929124,0.0001468963,0.00009439019],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992527,0.00007327522,0.0001673255,0.00003434332,0.0002052088,0.0001573439,0.00007310704,0.000004213332,0.00003248961],"genre_scores_gemma":[0.9996961,0.0001254999,0.000105364,0.000009306314,0.000007857609,0.00001100634,0.00002867906,5.778582e-7,0.00001556364],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8374894,"threshold_uncertainty_score":0.1375124,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01073952316725347,"score_gpt":0.2209663714583706,"score_spread":0.2102268482911171,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}