{"id":"W4290804245","doi":"10.1128/spectrum.02210-22","title":"Use of a Novel DNA-Loaded Alginate-Calcium Carbonate Biopolymer Surrogate to Study the Engulfment of Legionella pneumophila by Acanthamoeba polyphaga in Water Systems","year":2022,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Directorate for Biological Sciences; Royal Society Te Apārangi; Royal Society; Marsden Fund; University of Canterbury","keywords":"Legionella pneumophila; Calcium alginate; Biopolymer; Acanthamoeba; Microbiology; Legionella; Microorganism; Biology; Biofilm; Chemistry; Botany; Calcium; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006335911,0.0002840561,0.000446177,0.000208019,0.0001584081,0.00001801557,0.0006572352,0.0001384541,0.00003299046],"category_scores_gemma":[0.00002109641,0.0001976339,0.00012034,0.000354336,0.0002741804,0.00000537677,0.0009302511,0.0003072911,0.000006607998],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006769712,"about_ca_system_score_gemma":0.00009072757,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002342915,"about_ca_topic_score_gemma":0.00007167374,"domain_scores_codex":[0.9975139,0.0004388203,0.0005706702,0.0006254485,0.0001703087,0.0006808832],"domain_scores_gemma":[0.999011,0.00004422483,0.0001474061,0.0006469442,0.00006614263,0.00008428631],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004091878,0.0008943035,0.004192276,0.00001470694,0.0002048802,0.00001768767,0.0005552219,0.0005208013,0.9918531,0.00003118513,0.001291704,0.00001492197],"study_design_scores_gemma":[0.001464903,0.001104452,0.0006714241,0.000007472526,0.00002614565,0.0000804973,0.0008312921,0.00004388994,0.9838328,0.000002911685,0.0116929,0.000241359],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955025,0.0007737073,0.00003400257,0.001850283,0.0003571335,0.001076385,0.0003462039,0.000008506804,0.00005127519],"genre_scores_gemma":[0.9981816,0.00002377543,0.00000834432,0.0002167928,0.00005500876,0.0001495149,0.0002392305,0.00003760263,0.001088147],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0104012,"threshold_uncertainty_score":0.8059276,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02922218772779973,"score_gpt":0.2623663439539839,"score_spread":0.2331441562261842,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}