{"id":"W4291123448","doi":"10.1016/j.carres.2022.108648","title":"The structure of the LPS O-chain from five Fusobacterium nucleatum strains CTX47T, CC2_6JVN3, CC2_3FMU1, CC2_1JVN3, HM-996, containing alditol and phosphate in the main chain and development of mouse monoclonal antibodies specific to the O-antigens","year":2022,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases; BC Cancer Agency; National Institutes of Health","keywords":"Fusobacterium nucleatum; Chemistry; Lipopolysaccharide; Microbiology; Bacteria; Hexose; Biochemistry; Porphyromonas gingivalis; Immunology; Genetics; Biology; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008765149,0.0003415144,0.00009918185,0.0002691279,0.0001878519,0.0001651341,0.0002176963,0.000237001,0.0007579185],"category_scores_gemma":[0.0002102514,0.0001162126,0.0002252172,0.0003741254,0.0001634362,0.0001628875,0.0001542845,0.0003327521,0.0002024116],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003124606,"about_ca_system_score_gemma":0.0002608554,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002547227,"about_ca_topic_score_gemma":0.001942262,"domain_scores_codex":[0.9999504,0.000007067548,0.000005072392,0.000009357732,0.0000148841,0.00001318926],"domain_scores_gemma":[0.9998624,0.00002338668,0.00004157712,0.00002015481,0.00002953801,0.00002288719],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001192665,0.00001042172,0.0004987376,0.00001718831,0.000002693153,0.00003620947,0.00001676967,0.00007172376,0.998598,0.00006052812,0.00001715508,0.0005511842],"study_design_scores_gemma":[0.00003383689,0.0008710278,0.07975262,0.00003125362,0.00006653561,0.0005381098,0.0002039781,0.002017991,0.9112799,0.0002567571,0.004935786,0.00001242024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966367,0.0002821143,0.001442104,0.00003402329,0.00001099556,0.00001493495,0.0006613018,0.0000116437,0.000906076],"genre_scores_gemma":[0.9911075,0.0003491857,0.002418328,0.00005721327,0.000007694611,0.00002937216,0.00487062,0.00001056729,0.001149515],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002547227,"threshold_uncertainty_score":0.005064785,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03761506663892638,"score_gpt":0.3056566654388636,"score_spread":0.2680415987999372,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}