{"id":"W4292114703","doi":"10.1093/plphys/kiac378","title":"A retrotransposon insertion in <i>MUTL-HOMOLOG 1</i> affects wild rice seed set and cultivated rice crossover rate","year":2022,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Shanghai Jiao Tong University; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Oryza rufipogon; Oryza sativa; Retrotransposon; Genetics; Sterility; Japonica; Mutant; Gene; Botany; Transposable element","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001826322,0.0001523409,0.0001949839,0.00005528969,0.0001950795,0.00001211054,0.0001419418,0.0001111189,0.00002032146],"category_scores_gemma":[0.0000262753,0.0001490954,0.00004053323,0.0001120161,0.00006272933,0.000004173486,0.0001618719,0.0001720114,0.000004701332],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001286171,"about_ca_system_score_gemma":0.00002754716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001536458,"about_ca_topic_score_gemma":0.00002431764,"domain_scores_codex":[0.9988869,0.0002218823,0.000129998,0.000402496,0.00007415101,0.0002845264],"domain_scores_gemma":[0.999678,0.00003129139,0.00007551543,0.0001440488,0.00001709119,0.00005404071],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009175437,0.00007433338,0.008997681,0.00003777504,0.00002978169,0.00002179161,0.0001747584,0.0002334692,0.9868565,0.00002642399,0.002606854,0.00002308754],"study_design_scores_gemma":[0.004215294,0.001967555,0.8467903,0.00003134707,0.00004330655,0.0001847762,0.000482955,0.0004587062,0.1070254,0.0003215074,0.03781163,0.0006672549],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984738,0.0003214208,0.00001150217,0.0001163941,0.0001375618,0.0001552104,0.0004480834,0.00001653413,0.0003195056],"genre_scores_gemma":[0.997405,0.0002852237,0.00003402126,0.0008239272,0.00005202966,0.00002131401,0.001079587,0.000008388715,0.0002905448],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8798311,"threshold_uncertainty_score":0.6079934,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01040074167364932,"score_gpt":0.2125620216932792,"score_spread":0.2021612800196299,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}