{"id":"W4292114703","doi":"10.1093/plphys/kiac378","title":"A retrotransposon insertion in <i>MUTL-HOMOLOG 1</i> affects wild rice seed set and cultivated rice crossover rate","year":2022,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Shanghai Jiao Tong University; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Oryza rufipogon; Oryza sativa; Retrotransposon; Genetics; Sterility; Japonica; Mutant; Gene; Botany; Transposable element","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007087428,0.0003391445,0.0001404071,0.000217781,0.00007500191,0.0001641869,0.0002428947,0.000200701,0.0009746063],"category_scores_gemma":[0.00008573404,0.0001689106,0.0001883715,0.00009294115,0.000202813,0.0001011156,0.0001808263,0.000326465,0.0002375272],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002152903,"about_ca_system_score_gemma":0.00009455634,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004660859,"about_ca_topic_score_gemma":0.0005736644,"domain_scores_codex":[0.9999261,0.000008768357,0.00001077445,0.00002345174,0.00001287309,0.00001811011],"domain_scores_gemma":[0.9998285,0.00002658326,0.00007745728,0.00001477488,0.00000514159,0.0000475759],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004228355,0.000009731284,0.0003305237,0.000005927837,0.000001989051,0.00002201807,0.000006255713,0.00001557871,0.9993111,0.00001823819,0.000004982103,0.0002313096],"study_design_scores_gemma":[0.00003679859,0.0003142309,0.04920504,0.000004459537,0.00003970381,0.0004604241,0.00006308751,0.001240162,0.9477182,0.00004459616,0.0008627816,0.00001055418],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993495,0.00004947152,0.000280707,0.000010973,0.000003663205,0.000003260067,0.00009946694,0.00004142581,0.0001615859],"genre_scores_gemma":[0.9986186,0.00005382767,0.0003477414,0.00001420592,0.000001888296,0.00000736714,0.0002717297,0.0000224915,0.0006621109],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009746063,"threshold_uncertainty_score":0.003260374,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01040074167364932,"score_gpt":0.2125620216932792,"score_spread":0.2021612800196299,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}