{"id":"W4292169150","doi":"10.1186/s12870-022-03747-x","title":"Glucoraphanin and sulforaphane biosynthesis by melatonin mediating nitric oxide in hairy roots of broccoli (Brassica oleracea L. var. italica Planch): insights from transcriptome data","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genomics, phytochemicals, and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Gansu Agricultural University; National Natural Science Foundation of China; CMG Reservoir Simulation Foundation","keywords":"Glucoraphanin; Biology; Brassica oleracea; Sulforaphane; Transcriptome; Brassica; Hypocotyl; Botany; KEGG; Biosynthesis; Brassicaceae; Biochemistry; Glucosinolate; Gene; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002084696,0.0002844305,0.0004986934,0.000173262,0.0001055569,0.00001175378,0.0006936907,0.0002405324,0.00002953814],"category_scores_gemma":[0.0001419253,0.0002800916,0.00006724303,0.0002059685,0.0001910076,0.00001195728,0.0005408385,0.0002247952,0.000001498797],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002191553,"about_ca_system_score_gemma":0.00009611012,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004512644,"about_ca_topic_score_gemma":0.0004221497,"domain_scores_codex":[0.9978015,0.0003202214,0.0005277182,0.000848407,0.0001261454,0.0003759483],"domain_scores_gemma":[0.9987976,0.0002280096,0.0002674762,0.0005680037,0.0000264192,0.0001124782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004022595,0.0001510047,0.03712123,0.00002628585,0.0000940625,0.000006774836,0.00007813601,0.000009847906,0.9604948,0.00004081545,0.001263193,0.0003115919],"study_design_scores_gemma":[0.001631373,0.000228454,0.01941654,0.00002053038,0.00004826734,0.00002579237,0.0004495631,0.0002652988,0.9656553,0.0003224551,0.01147086,0.0004655531],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9785644,0.008507898,0.0002769764,0.00004876179,0.000125691,0.0002673369,0.01213278,0.00001455874,0.00006158218],"genre_scores_gemma":[0.98464,0.0005818148,0.000879246,0.0001473341,0.00009609776,0.00003952864,0.01356969,0.00002710192,0.00001919027],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01770469,"threshold_uncertainty_score":0.9999651,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01695406423394338,"score_gpt":0.2319843206800509,"score_spread":0.2150302564461075,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}