{"id":"W4292425340","doi":"10.1111/1462-2920.16145","title":"Cryptosporulation in <scp> <i>Kurthia</i> </scp> spp. forces a rethinking of asporogenesis in Firmicutes","year":2022,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Fondation Pierre Mercier pour la Science; German Network for Bioinformatics Infrastructure; Fondation Pierre Mercier; Bundesministerium für Bildung und Forschung; Bundesministerium für Verkehr und Digitale Infrastruktur; University of Bern; McGill University; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Firmicutes; Biology; Endospore; Spore; Bacillus (shape); Proteobacteria; Strain (injury); Microbiology; Bacilli; Phenotype; Genetics; Bacteria; Gene; 16S ribosomal RNA; Anatomy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001567172,0.0003869103,0.0002352226,0.0005827287,0.000385297,0.0005142615,0.0002083286,0.0002542907,0.000487472],"category_scores_gemma":[0.0003102015,0.0001622238,0.0002636171,0.000727921,0.00034087,0.0003927132,0.0006607648,0.0003895483,0.0002154065],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000264469,"about_ca_system_score_gemma":0.0003959572,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002732856,"about_ca_topic_score_gemma":0.002525365,"domain_scores_codex":[0.9998404,0.00001365155,0.00001767295,0.00004527638,0.0000386666,0.00004445578],"domain_scores_gemma":[0.9997399,0.000022382,0.0001089289,0.00003157079,0.00004896228,0.00004814283],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001826033,0.00003117524,0.04336421,0.0001464683,0.00002341474,0.0005002917,0.0003852966,0.0001922048,0.9448334,0.0002029999,0.00005841146,0.01007957],"study_design_scores_gemma":[0.00001497922,0.0005834567,0.8528262,0.00005850664,0.0000966915,0.003011051,0.002122492,0.001003587,0.1336661,0.0003646458,0.006202055,0.00005038588],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987469,0.0001392632,0.0003167811,0.00004103346,0.000002481381,0.000008154367,0.0001909253,0.00001249303,0.000541923],"genre_scores_gemma":[0.997216,0.0002686478,0.001300481,0.00004046552,0.000005400263,0.00001204441,0.0007440119,0.00001311813,0.0003998526],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002732856,"threshold_uncertainty_score":0.005433917,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005427687202746199,"score_gpt":0.1844939971471653,"score_spread":0.1790663099444191,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}