{"id":"W4292661900","doi":"10.1099/acmi.0.000405","title":"Microbiome composition and autochthonous probiotics from contrasting probiosis/dysbiosis states in cobia (Rachycentron canadum) fish epitheliocystis","year":2022,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Biology; Microbiome; Microbiology; Antibiosis; Vibrio; 16S ribosomal RNA; Probiotic; Dysbiosis; Bacteroides; Zoology; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003674741,0.0005729202,0.0008068014,0.000457477,0.00076373,0.0001277166,0.0008888275,0.0003245629,0.001077075],"category_scores_gemma":[0.00003307679,0.0005881624,0.0001369141,0.0005150836,0.0004670288,0.0002593388,0.001334357,0.0007663689,0.0000716678],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004064236,"about_ca_system_score_gemma":0.0001234883,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003652919,"about_ca_topic_score_gemma":0.002162602,"domain_scores_codex":[0.996161,0.0007508285,0.0008240675,0.001134924,0.0000385213,0.001090589],"domain_scores_gemma":[0.9987169,0.0002488063,0.0004508047,0.0004224737,0.00009019609,0.00007083145],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005043205,0.0004544636,0.01161641,0.00006466101,0.0003821827,0.00005862463,0.0008873581,0.00006633947,0.9692129,0.0001157207,0.01591673,0.0007202582],"study_design_scores_gemma":[0.02652388,0.001688358,0.08661426,0.00053183,0.001508861,0.001658628,0.006311832,0.0001662797,0.5717554,0.0004957509,0.2976197,0.005125198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9863186,0.00342263,0.00009311808,0.001771047,0.001065444,0.001601179,0.005416583,0.0001876874,0.0001237348],"genre_scores_gemma":[0.9847564,0.000160691,0.000162792,0.002428224,0.00004590547,0.000181419,0.01175403,0.00006099589,0.0004495355],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3974575,"threshold_uncertainty_score":0.9998361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009264653963476574,"score_gpt":0.2261487806737523,"score_spread":0.2168841267102757,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}