{"id":"W4292847736","doi":"10.1371/journal.pone.0271492","title":"Proteome and morphological analysis show unexpected differences between promastigotes of Leishmania amazonensis PH8 and LV79 strains","year":2022,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo; McMaster University","keywords":"Proteome; Biology; Virulence; Leishmania; Infectivity; Microbiology; Amastigote; Biochemistry; Gene; Virology; Parasite hosting; Virus","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003212951,0.0001997043,0.001059483,0.0004168892,0.0002483002,0.00002893378,0.0001334964,0.00005915574,0.0003559163],"category_scores_gemma":[0.0005340802,0.000159483,0.00008816846,0.0009298337,0.0004573648,0.00006300594,0.0004562645,0.000386986,0.000001364014],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004962008,"about_ca_system_score_gemma":0.00004307573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001412994,"about_ca_topic_score_gemma":0.00004039023,"domain_scores_codex":[0.997642,0.0002004419,0.0003586624,0.0004915834,0.0009642263,0.0003430322],"domain_scores_gemma":[0.9989739,0.0002363299,0.000141164,0.0002822001,0.0001796031,0.0001867884],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000927952,0.0009703547,0.8614409,0.0002208927,0.004046781,0.00006644495,0.0006506041,7.036811e-7,0.1320163,0.00003061847,0.000029498,0.000434115],"study_design_scores_gemma":[0.0008314057,0.00157143,0.9847633,0.00005430799,0.002023943,0.000009321015,0.0009101508,0.0003343488,0.009227115,0.0001163471,0.000004597189,0.0001537147],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955764,0.0005805207,0.00001932468,0.002430185,0.000003970968,0.000956591,0.0001476172,0.00006863832,0.0002167256],"genre_scores_gemma":[0.9971798,0.0001564389,0.002023696,0.0000344523,0.00005544943,0.0002300942,0.00004902183,0.00001680248,0.0002542151],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1233224,"threshold_uncertainty_score":0.6503527,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09875839711444005,"score_gpt":0.2816421816922163,"score_spread":0.1828837845777762,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}