{"id":"W4293071242","doi":"10.1111/tpj.15949","title":"Proximity‐dependent biotinylation identifies a suite of candidate effector proteins from <i>Fusarium graminearum</i>","year":2022,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Carleton University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biotinylation; Suite; Effector; Fusarium; Biology; Computational biology; Genetics; Cell biology; Molecular biology; Geography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004382353,0.0001089356,0.0001334903,0.00003637647,0.0004611902,0.00003297441,0.0002394595,0.00005722759,0.00002897674],"category_scores_gemma":[0.00003663757,0.00006978898,0.00008956942,0.000066336,0.00007226233,0.00000374203,0.0002317817,0.0003478384,0.000003396044],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001733167,"about_ca_system_score_gemma":0.0000514516,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000167326,"about_ca_topic_score_gemma":0.00004604077,"domain_scores_codex":[0.9989939,0.0002136652,0.0002271917,0.0001411708,0.0002496399,0.0001743774],"domain_scores_gemma":[0.9995036,0.00002427786,0.0002229207,0.000165924,0.00004440602,0.00003883101],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002429935,0.0000720992,0.002307552,0.00001198371,0.0002621599,0.0000141834,0.0003947772,0.0001172069,0.9947966,0.00001281417,0.001425772,0.0003418544],"study_design_scores_gemma":[0.0009447412,0.000463043,0.00659554,0.00001836378,0.0001081748,0.0003876541,0.0005450688,0.0001223285,0.9820294,0.0001890937,0.008415478,0.000181091],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952878,0.002084968,0.0001970834,0.0005637407,0.0005909479,0.0002779306,0.0008418353,0.000007168489,0.0001484903],"genre_scores_gemma":[0.9983257,0.0004136565,0.00006114051,0.00007484788,0.0002424197,0.0000131702,0.0003325818,0.0000109006,0.0005255761],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01276718,"threshold_uncertainty_score":0.3547149,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00839357335776495,"score_gpt":0.2096216216329186,"score_spread":0.2012280482751537,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}