{"id":"W4293104848","doi":"10.1093/ve/veac077","title":"A threat from both sides: Multiple introductions of genetically distinct H5 HPAI viruses into Canada via both East Asia-Australasia/Pacific and Atlantic flyways","year":2022,"lang":"en","type":"article","venue":"Virus Evolution","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":true,"ca_institutions":"Government of British Columbia; University of British Columbia; University of Manitoba; University of Saskatchewan; Ministry of Agriculture; Canadian Science Centre for Human and Animal Health","funders":"National Institute of Allergy and Infectious Diseases; U.S. Department of Health and Human Services; National Institutes of Health; Animal and Plant Health Agency; Canadian Food Inspection Agency; Canadian Wildlife Health Cooperative","keywords":"Influenza A virus subtype H5N1; Reassortment; Biology; Lineage (genetic); Phylogenetic tree; Zoology; Waterfowl; Virology; Geography; Virus; Ecology; Gene; Coronavirus disease 2019 (COVID-19); Genetics; Habitat","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003865256,0.0004810938,0.0002454558,0.0006985997,0.004932682,0.002757873,0.000611806,0.0008266825,0.002792119],"category_scores_gemma":[0.0007679207,0.0002112598,0.0003712019,0.0009184959,0.001121565,0.0007409687,0.001760736,0.001676307,0.0002670934],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01477437,"about_ca_system_score_gemma":0.01717639,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9399841,"about_ca_topic_score_gemma":0.9666189,"domain_scores_codex":[0.9991321,0.00004400453,0.00001879997,0.0001157504,0.0003105288,0.0003788379],"domain_scores_gemma":[0.998867,0.00005635025,0.0001808487,0.00003748885,0.0004180341,0.0004401776],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004833413,0.000132519,0.8861108,0.0001729139,0.0002395074,0.006734196,0.007340138,0.0006123146,0.01799561,0.002177369,0.009439474,0.06856196],"study_design_scores_gemma":[0.00002349783,0.0002635946,0.8991169,0.0002795125,0.0002107184,0.004411824,0.03603038,0.001578892,0.004343284,0.0008004673,0.05278047,0.0001605024],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9816668,0.001978633,0.0006598717,0.002260803,0.0001424301,0.00004576333,0.0005379441,0.00004461097,0.01266312],"genre_scores_gemma":[0.9936044,0.001419946,0.0007046005,0.001015712,0.00002731453,0.000007819067,0.0002900008,0.00001059218,0.002919654],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06001592,"threshold_uncertainty_score":0.1207387,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03183014675772269,"score_gpt":0.2834742345862876,"score_spread":0.2516440878285648,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}