{"id":"W4293168364","doi":"10.1002/ajpa.24604","title":"Using phylogeographic link‐prediction in primates to prioritize human parasite screening","year":2022,"lang":"en","type":"article","venue":"American Journal of Biological Anthropology","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Fogarty International Center; Triangle Comparative and Evolutionary Medicine Center, Duke University; North Carolina Central University; North Carolina State University; National Institute of Food and Agriculture; National Institutes of Health; National Science Foundation","keywords":"Biology; Phylogenetic tree; Generalist and specialist species; Phylogeography; Evolutionary biology; Infectious disease (medical specialty); Phylogenetics; Transmission (telecommunications); Host (biology); Disease; Emerging infectious disease; Zoology; Ecology; Habitat; Outbreak; Virology; Genetics; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002587464,0.0008879399,0.000740446,0.003149989,0.0007879066,0.001355615,0.0008870021,0.0009891047,0.003315858],"category_scores_gemma":[0.008575534,0.0003780703,0.000968398,0.001649485,0.0004342311,0.0009114397,0.001084631,0.000985165,0.0006687903],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006946887,"about_ca_system_score_gemma":0.0008329164,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01321995,"about_ca_topic_score_gemma":0.0157552,"domain_scores_codex":[0.9992489,0.0003920822,0.00003248221,0.0002078567,0.000058634,0.00005993786],"domain_scores_gemma":[0.9962257,0.002662393,0.0004908507,0.0002172776,0.0002240886,0.0001797015],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0004065879,0.0002184109,0.55555,0.000240205,0.0005171911,0.0007670307,0.0004468665,0.3632177,0.001390471,0.001326171,0.004298606,0.0716209],"study_design_scores_gemma":[0.00002410988,0.00005200552,0.02200907,0.00004306261,0.00005217622,0.0001668639,0.0001424237,0.9733367,0.0001962284,0.00279114,0.001174107,0.00001213475],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9132897,0.001391818,0.07348142,0.00160184,0.00005018177,0.0001325841,0.004538746,0.001162364,0.004351272],"genre_scores_gemma":[0.9690948,0.0002072129,0.0267597,0.0001296799,0.00004531554,0.00005943683,0.003144021,0.00006441183,0.0004955895],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01321995,"threshold_uncertainty_score":0.02628601,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0672799960899819,"score_gpt":0.3916660063891209,"score_spread":0.3243860102991389,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}