{"id":"W4293475811","doi":"10.1021/acs.biochem.2c00367","title":"Comparative Analysis of Corrinoid Profiles across Host-Associated and Environmental Samples","year":2022,"lang":"en","type":"review","venue":"Biochemistry","topic":"Porphyrin Metabolism and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; University of California Berkeley; U.S. Department of Energy; Biological and Environmental Research; National Science Foundation","keywords":"Cobalamin; Corrinoid; Biology; Microbial metabolism; Bacteria; Host (biology); Microbiome; Metagenomics; Cofactor; Vitamin B12; Microbial population biology; Metabolism; Ecology; Biochemistry; Enzyme; Bioinformatics; Genetics; Methyltransferase","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002366463,0.0003504837,0.0003463558,0.001215017,0.0003407783,0.0005793723,0.0001634228,0.0002989096,0.0008192304],"category_scores_gemma":[0.000557363,0.000106546,0.000291703,0.001223011,0.0002719761,0.000190672,0.0003857141,0.0002326919,0.000319171],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001242423,"about_ca_system_score_gemma":0.0001933875,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003439383,"about_ca_topic_score_gemma":0.005054413,"domain_scores_codex":[0.9995469,0.0000543126,0.00003321171,0.0001658522,0.0001216503,0.00007801311],"domain_scores_gemma":[0.9996314,0.0000672942,0.00008951667,0.0000279634,0.0001340325,0.00004976199],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00062505,0.000108718,0.1695559,0.0002180697,0.0001434502,0.0003816364,0.0004997987,0.00008829732,0.8087565,0.00008528771,0.0002316024,0.01930563],"study_design_scores_gemma":[0.000005343969,0.00034024,0.8993036,0.00001805519,0.0001339083,0.0009166677,0.001202122,0.0004760274,0.09322606,0.00005834849,0.004290636,0.00002889259],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.9933964,0.0007726034,0.001475969,0.000035185,0.00001591201,0.00002615557,0.003057039,0.00006926299,0.00115148],"genre_scores_gemma":[0.9885404,0.0007358642,0.004172061,0.00008683073,0.00001761945,0.00005260472,0.005070014,0.00003760357,0.001286927],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.003439383,"threshold_uncertainty_score":0.006838739,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03150457809444758,"score_gpt":0.3161153978278579,"score_spread":0.2846108197334103,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}