{"id":"W4293559793","doi":"10.1016/j.healun.2022.08.014","title":"The molecular features of chronic lung allograft dysfunction in lung transplant airway mucosa","year":2022,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Transplantation: Methods and Outcomes","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"ca_institutions":"University Health Network; University of Alberta","funders":"Canada Foundation for Innovation; University of Alberta; Natera; Ministry of Advanced Education and Technology; Mendez National Institute of Transplantation Foundation; Genome Canada","keywords":"Lung; Parenchyma; Microarray; Lamina propria; Medicine; Airway; Lung transplantation; Inflammation; Pathology; Gene; Internal medicine; Gene expression; Biology; Surgery; Epithelium; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001632926,0.0001357803,0.0002987079,0.0001684457,0.0002823533,0.00001430192,0.0001094641,0.0000410757,0.00003191601],"category_scores_gemma":[0.000008373558,0.00008030728,0.0001409022,0.0002266639,0.00007824798,0.0001052128,0.000005187603,0.0005163762,1.481847e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007596609,"about_ca_system_score_gemma":0.0001210746,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009753049,"about_ca_topic_score_gemma":0.0001513385,"domain_scores_codex":[0.9982458,0.0004739196,0.0005249263,0.0001020522,0.0004584176,0.0001949191],"domain_scores_gemma":[0.9991062,0.0004649887,0.0001879016,0.000122041,0.00006125685,0.00005764696],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.02922312,0.000580231,0.216426,0.004477407,0.001391004,0.0007688943,0.03727075,0.0124262,0.6764067,0.00397383,0.001556531,0.01549927],"study_design_scores_gemma":[0.008869262,0.001274241,0.9368063,0.0007627577,0.00291745,0.008252182,0.001700989,0.005117157,0.03248997,0.0002646975,0.001264419,0.0002806176],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.966735,0.01659578,0.0110961,0.004612695,0.0003844682,0.0004378062,0.00002967329,0.00001127487,0.00009720682],"genre_scores_gemma":[0.9918957,0.007258011,0.0004718254,0.0001953059,0.00007411062,0.000008968081,0.00002667711,0.00001514498,0.0000542856],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7203802,"threshold_uncertainty_score":0.3274836,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007412871075651886,"score_gpt":0.2786880738443173,"score_spread":0.2712752027686655,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}