{"id":"W4293769549","doi":"10.3390/pathogens11090972","title":"Microbiota Transplantation in Day-Old Broiler Chickens Ameliorates Necrotic Enteritis via Modulation of the Intestinal Microbiota and Host Immune Responses","year":2022,"lang":"en","type":"article","venue":"Pathogens","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Chinook Regional Hospital; University of Lethbridge; University of Alberta; Alberta Health Services; Agriculture and Agri-Food Canada","funders":"Canadian Glycomics Network; Alberta Innovates; Alberta Agriculture and Forestry; Canadian Poultry Research Council","keywords":"Biology; Clostridium perfringens; Butyrate; Broiler; Microbiology; Jejunum; Immune system; Pathogen; Clostridium; Microbiome; Propionate; Lactobacillus; Feces; Short-chain fatty acid; Bacteria; Immunology; Animal science; Endocrinology; Food science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004189353,0.000164814,0.0002803699,0.0002444968,0.0001829398,0.0000199327,0.0001453592,0.00005817176,0.0001721204],"category_scores_gemma":[0.000126406,0.0001446637,0.0001043569,0.0005913898,0.0001496739,0.00003943096,0.0001505875,0.000386441,0.000003933716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001286201,"about_ca_system_score_gemma":0.0001033471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003400884,"about_ca_topic_score_gemma":0.00008786694,"domain_scores_codex":[0.9984528,0.0002932616,0.0004211224,0.0003156903,0.0002343514,0.0002827222],"domain_scores_gemma":[0.9992676,0.000143305,0.0001138346,0.0003271158,0.00008693528,0.00006123943],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005438837,0.0002054065,0.03648257,0.000129579,0.00001997431,0.00007225936,0.001034161,0.00002146073,0.9605154,0.00001092136,0.00002958218,0.0009348475],"study_design_scores_gemma":[0.001202046,0.0002725412,0.5630641,0.0001621758,0.00005745803,0.0007187376,0.0003337236,0.0004447487,0.4335063,0.00000800495,0.0001099452,0.0001202327],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971883,0.000636703,0.00002509195,0.0008733586,0.0001135489,0.0005934223,0.0005039925,0.00001767671,0.00004785566],"genre_scores_gemma":[0.9989778,0.0002511265,0.0001213139,0.00007862181,0.0000352781,0.00003744999,0.0001241963,0.00002644105,0.0003477597],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5270091,"threshold_uncertainty_score":0.5899213,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01459571352235789,"score_gpt":0.2520312244985983,"score_spread":0.2374355109762404,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}