{"id":"W4295037640","doi":"10.1021/acs.est.2c02624","title":"Transient Oxygen Exposure Causes Profound and Lasting Changes to a Benzene-Degrading Methanogenic Community","year":2022,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Alberta Innovates; Genome Canada; Ontario Genomics; Mitacs; Government of Ontario; Imperial Oil Limited","keywords":"Methanogenesis; Benzene; Environmental chemistry; Anaerobic exercise; Chemistry; Oxygen; Anoxic waters; Archaea; Microbial population biology; Biodegradation; Enrichment culture; Microbiology; Food science; Biology; Bacteria; Methane; Biochemistry; Organic chemistry; Physiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001128977,0.0003095094,0.0003362322,0.0001063217,0.0002036698,0.0003246723,0.0002243969,0.0003877601,0.0006581242],"category_scores_gemma":[0.0002086743,0.0001147382,0.0002333985,0.0001423938,0.0002352807,0.0002271577,0.0004621518,0.0004312856,0.0001136183],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001733004,"about_ca_system_score_gemma":0.0001783973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001239412,"about_ca_topic_score_gemma":0.001582846,"domain_scores_codex":[0.999795,0.00002200132,0.00001089813,0.00005384915,0.00005367407,0.00006469501],"domain_scores_gemma":[0.9998862,0.00003149547,0.00002765547,0.00001320206,0.0000177381,0.00002377201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002099596,0.00003636295,0.001374776,0.0000197443,0.000006681925,0.0000740176,0.00003910625,0.00004687838,0.9969652,0.00001321807,0.00001568152,0.001198297],"study_design_scores_gemma":[0.00001460538,0.001452115,0.02837575,0.00000842244,0.0000319402,0.0001425994,0.0002766347,0.000934043,0.9675611,0.00006035712,0.001129466,0.0000129222],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989536,0.0001579851,0.0005296888,0.00003284186,0.000009459915,0.000006646495,0.0001205906,0.00001083388,0.0001783606],"genre_scores_gemma":[0.9978303,0.0001884806,0.0008940897,0.00005377641,0.000007785347,0.00001676848,0.0003586155,0.00001079257,0.0006394623],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001239412,"threshold_uncertainty_score":0.002464414,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01410273197150786,"score_gpt":0.2227986345564341,"score_spread":0.2086959025849262,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}