{"id":"W4295886858","doi":"10.1128/spectrum.01151-22","title":"Immunoinformatics Approach to Design Novel Subunit Vaccine against the Epstein-Barr Virus","year":2022,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Epitope; Immune system; Virology; Virus; Biology; Epstein–Barr virus; CTL*; Cytotoxic T cell; Immunology; Antigen; CD8; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002215515,0.0004718092,0.0003701238,0.0005173403,0.0003007067,0.0007073959,0.0003392127,0.0004124117,0.001943242],"category_scores_gemma":[0.0001864155,0.0002200436,0.0005280129,0.0003426008,0.0003007981,0.0005497311,0.0004004564,0.0006503871,0.0006660352],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004042421,"about_ca_system_score_gemma":0.0006430341,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000254742,"about_ca_topic_score_gemma":0.000290191,"domain_scores_codex":[0.9998807,0.00002797528,0.000007126981,0.00003443645,0.00003602382,0.00001371026],"domain_scores_gemma":[0.9999593,0.00001057824,0.000008669416,0.000004510418,0.00001120468,0.00000565527],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0001658787,0.0003403104,0.002113494,0.001111487,0.0001179586,0.0004262981,0.0002065447,0.08255348,0.5934205,0.1318181,0.004466967,0.1832591],"study_design_scores_gemma":[0.00007340866,0.000621661,0.001420069,0.0001324913,0.0001606834,0.0009430552,0.000228993,0.4098077,0.4013668,0.07635608,0.1088038,0.0000851912],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.08895968,0.006478228,0.8709125,0.001674335,0.000317364,0.0001926698,0.0003594481,0.0009390482,0.03016684],"genre_scores_gemma":[0.4587685,0.009773701,0.5172958,0.0008672075,0.000132485,0.0004926348,0.0008852647,0.000134528,0.01164981],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.001943242,"threshold_uncertainty_score":0.006500781,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01450863550682938,"score_gpt":0.2058929380504646,"score_spread":0.1913843025436352,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}