{"id":"W4295942802","doi":"10.1111/syen.12569","title":"A genome‐wide phylogeny and the diversification of genus <i>Liriomyza</i> (Diptera: Agromyzidae) inferred from anchored phylogenomics","year":2022,"lang":"en","type":"article","venue":"Systematic Entomology","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"China Scholarship Council; National Science Foundation","keywords":"Biology; Agromyzidae; Phylogenetic tree; Phylogenetics; Clade; Genus; Phylogenomics; Evolutionary biology; Zoology; Botany; PEST analysis; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003076331,0.0001994188,0.0002369527,0.001148944,0.0002466222,0.0005255122,0.0001723034,0.0002920125,0.0008718412],"category_scores_gemma":[0.0005005043,0.0001619273,0.0003379603,0.0009000088,0.0001520098,0.0002380371,0.0003426768,0.0004017071,0.0002722756],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001808399,"about_ca_system_score_gemma":0.00007583848,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001028826,"about_ca_topic_score_gemma":0.002165508,"domain_scores_codex":[0.9998382,0.00003295299,0.00001080991,0.00007423118,0.00001909224,0.00002466448],"domain_scores_gemma":[0.9995988,0.0001037455,0.0001834175,0.0000351174,0.00003876916,0.00004018427],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000639321,0.00002929629,0.4329248,0.0003591928,0.0005956863,0.0001813287,0.0006025733,0.001129642,0.541994,0.0002750732,0.0005268826,0.0207421],"study_design_scores_gemma":[0.000008123461,0.00005304543,0.9920236,0.00004228054,0.0001594061,0.0001837037,0.0002160922,0.002671546,0.002885792,0.00009417313,0.001653537,0.000008830499],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962758,0.000461235,0.001119953,0.0000381313,0.000002314189,0.000004727824,0.001673119,0.00003557201,0.0003891631],"genre_scores_gemma":[0.994962,0.0001933508,0.001654288,0.00003456299,0.00000384653,0.000007083243,0.003046902,0.00001455337,0.00008348827],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001148944,"threshold_uncertainty_score":0.002916574,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01075116524538997,"score_gpt":0.1916930795399444,"score_spread":0.1809419142945544,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}