{"id":"W4296130015","doi":"10.1101/2022.09.09.22279675","title":"BACTERIAL ONCOTRAITS BUT NOT BIOFILMS ARE ASSOCIATED WITH DYSPLASIA IN ULCERATIVE COLITIS","year":2022,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"KWF Kankerbestrijding; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Deutsche Forschungsgemeinschaft","keywords":"Dysplasia; Feces; Gastroenterology; Biology; Ulcerative colitis; Microbiology; Internal medicine; Pathology; Medicine; Disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004875375,0.0002789252,0.0003251316,0.0007951929,0.0003798425,0.0006673193,0.0001754112,0.0003738719,0.001726235],"category_scores_gemma":[0.001480749,0.0002730443,0.0003783523,0.0008154172,0.0001753454,0.0002556693,0.0005326975,0.000455426,0.0001292217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001477958,"about_ca_system_score_gemma":0.0001524214,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002008084,"about_ca_topic_score_gemma":0.002392196,"domain_scores_codex":[0.9996188,0.0001162054,0.00004477048,0.00008443811,0.0000821259,0.00005366169],"domain_scores_gemma":[0.9988849,0.0001771189,0.0005584274,0.00006471402,0.0001378399,0.0001768991],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002896439,0.00002396105,0.9950466,0.00002785291,0.00008980506,0.00006254874,0.00004331918,0.00003471482,0.002312968,0.00001328511,0.00004654664,0.002008823],"study_design_scores_gemma":[0.000002893479,0.00006980943,0.9990143,0.00001135222,0.00004383181,0.0002031203,0.0001057083,0.0002534995,0.0001677034,0.00002670413,0.00009907199,0.000001905298],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984182,0.0009807184,0.0002002348,0.00003120856,0.000007230213,0.000003674802,0.0001359627,0.000004167027,0.0002185026],"genre_scores_gemma":[0.9995409,0.000137914,0.0001374907,0.000005209954,0.000004568467,0.000002254767,0.00007166308,0.000001141065,0.00009895449],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002008084,"threshold_uncertainty_score":0.005774856,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0171416160752241,"score_gpt":0.2624896558121295,"score_spread":0.2453480397369054,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}