{"id":"W4296230903","doi":"10.1158/1557-3265.sarcomas22-b027","title":"Abstract B027: The development of a multiscale transcriptional atlas of sarcoma","year":2022,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Tumors and Oncological Cases","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Princess Margaret Cancer Centre; Mount Sinai Hospital; SickKids Foundation","funders":"","keywords":"Sarcoma; KRAS; Pediatric cancer; Biology; Cancer; Synovial sarcoma; Pathology; Computational biology; Bioinformatics; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001049544,0.0004137754,0.0004200035,0.00138109,0.0004534653,0.0007467769,0.0009008976,0.000462341,0.004914604],"category_scores_gemma":[0.001880171,0.000334407,0.0006434357,0.001416786,0.0002798487,0.0004008449,0.001186803,0.0007237042,0.00210625],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001085051,"about_ca_system_score_gemma":0.001600709,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00916831,"about_ca_topic_score_gemma":0.01912981,"domain_scores_codex":[0.9991411,0.0001455303,0.00004983563,0.0003246244,0.0002784567,0.00006046028],"domain_scores_gemma":[0.9991229,0.0002057774,0.00009708529,0.0001949479,0.0002804041,0.00009894981],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007686262,0.0002656174,0.08654729,0.0008170136,0.0004990054,0.0004320637,0.000563756,0.05830629,0.4297348,0.01562061,0.1628821,0.2435627],"study_design_scores_gemma":[0.0002253291,0.0004218978,0.2160576,0.0001525495,0.0003700085,0.001114144,0.0003392039,0.2803719,0.147019,0.01287818,0.3409201,0.0001303054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.2694867,0.001142689,0.3921513,0.001164962,0.0001867697,0.0005549833,0.2937434,0.02277001,0.01879917],"genre_scores_gemma":[0.2595724,0.00050002,0.3923844,0.0004982531,0.00009866001,0.001201343,0.3352146,0.002082251,0.008448081],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.00916831,"threshold_uncertainty_score":0.01822984,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.4463306395909883,"score_gpt":0.5580363148271056,"score_spread":0.1117056752361172,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}