{"id":"W4296373993","doi":"10.1038/s41467-022-32993-8","title":"Structural characterization of a soil viral auxiliary metabolic gene product – a functional chitosanase","year":2022,"lang":"en","type":"article","venue":"Nature Communications","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biological and Environmental Research; Basic Energy Sciences; National Center for Research Resources; National Institute of General Medical Sciences; Office of Science; National Institutes of Health; University of British Columbia; Joint Genome Institute; U.S. Department of Energy","keywords":"Chitosanase; Biology; Gene; Metagenomics; Viral replication; Computational biology; Enzyme; Genetics; Biochemistry; Virus","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001088803,0.0001021816,0.0001214566,0.00005896678,0.0006315825,0.00001671153,0.0006011895,0.00004697113,0.002607676],"category_scores_gemma":[0.000025496,0.0001039859,0.00008404325,0.0003681007,0.0001408912,0.0002451528,0.0009123143,0.0006577591,0.00002543925],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007732365,"about_ca_system_score_gemma":0.0000289454,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001967531,"about_ca_topic_score_gemma":0.0002329609,"domain_scores_codex":[0.9991258,0.0001512382,0.000222316,0.0001943651,0.0001769078,0.0001293879],"domain_scores_gemma":[0.9988351,0.00002605572,0.0001638843,0.0009134822,0.00002096851,0.00004050491],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002414459,0.0001143363,0.001787363,0.000001691468,0.00002191036,3.267066e-7,0.0001765849,0.0001867603,0.9948691,0.0005454057,0.0006159199,0.001656419],"study_design_scores_gemma":[0.0002336393,0.00003761535,0.872534,0.000002742195,0.00004883238,0.00006238642,0.00004916426,0.001266263,0.05063112,0.00006210072,0.07489906,0.0001730348],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955071,0.0004237305,0.00001933084,0.002142477,0.0003979831,0.0002205701,0.0002913873,0.00003727127,0.0009601681],"genre_scores_gemma":[0.9971538,0.00007781071,0.0007102028,0.0003854972,0.00005516624,0.00008805894,0.001072051,0.00001334026,0.0004440336],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.944238,"threshold_uncertainty_score":0.9983041,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01210736565023082,"score_gpt":0.2432716588813044,"score_spread":0.2311642932310735,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}