{"id":"W4296621722","doi":"10.1093/jas/skac247.027","title":"27 Evaluating the Functional Differences at Genome, Transcriptome and Methylome Level between ARS-UCD1.2 and UMD 3.1 Bovine Reference Genomes","year":2022,"lang":"en","type":"article","venue":"Journal of Animal Science","topic":"Chromium effects and bioremediation","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Dry matter; Animal science; Randomized block design; CTL*; Chromium; Propionate; Crossbreed; Biology; Chemistry; Biochemistry; Horticulture; Cytotoxic T cell","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000423887,0.0002891854,0.0003648376,0.0005561503,0.0003035933,0.000538103,0.0002628373,0.0002604637,0.002156142],"category_scores_gemma":[0.0003667037,0.0001550446,0.0002987128,0.0007229532,0.0001036342,0.0001205469,0.0002599655,0.0001898225,0.0006000915],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003781201,"about_ca_system_score_gemma":0.0001851738,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007810485,"about_ca_topic_score_gemma":0.01728041,"domain_scores_codex":[0.9997198,0.00003151336,0.00001800708,0.000120626,0.00006826682,0.00004173007],"domain_scores_gemma":[0.9997703,0.00004254947,0.00008606179,0.00002629956,0.00004761485,0.00002704173],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008919402,0.00003377996,0.02686285,0.0001717251,0.00007716802,0.00004894528,0.0001284182,0.0003376978,0.9609407,0.00009491765,0.0003711227,0.01004076],"study_design_scores_gemma":[0.00008018254,0.0009390113,0.8153462,0.00008145969,0.0002953144,0.0006398788,0.0003772127,0.00509447,0.1577781,0.000114532,0.01922352,0.00003017474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9746193,0.001481794,0.003900033,0.00005799394,0.00001549951,0.00002365564,0.01823291,0.000126747,0.001541993],"genre_scores_gemma":[0.92576,0.0007270555,0.009242897,0.000139969,0.000009455599,0.0000778706,0.06027258,0.00008806694,0.00368213],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007810485,"threshold_uncertainty_score":0.01553005,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0940905602732248,"score_gpt":0.2969352604974356,"score_spread":0.2028447002242108,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}