{"id":"W4296639039","doi":"10.1038/s41598-022-20076-z","title":"Municipal and neighbourhood level wastewater surveillance and subtyping of an influenza virus outbreak","year":2022,"lang":"en","type":"article","venue":"Scientific Reports","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":161,"is_retracted":false,"has_abstract":true,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"University of Ottawa","keywords":"Subtyping; Outbreak; Pandemic; Environmental health; Virology; Influenza A virus; Population; Public health; Virus; Neighbourhood (mathematics); Medicine; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Computer science; Disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004306813,0.0003253884,0.0003941983,0.0006151783,0.0004776146,0.0005475281,0.0002236252,0.0004314285,0.0006783136],"category_scores_gemma":[0.0008120826,0.0001759186,0.0002690355,0.0006973559,0.0001919099,0.0002550485,0.000466689,0.0002269804,0.0002865496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006584941,"about_ca_system_score_gemma":0.0006628184,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01254994,"about_ca_topic_score_gemma":0.02129398,"domain_scores_codex":[0.9995436,0.00009504803,0.00003438232,0.0001085098,0.0001594633,0.00005899134],"domain_scores_gemma":[0.9996352,0.00005497214,0.00009512348,0.00004149056,0.0001200584,0.00005324004],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008308203,0.0003251075,0.6982312,0.0001764768,0.00008077121,0.001250647,0.0010053,0.02276349,0.2188699,0.0002822084,0.001636391,0.05454762],"study_design_scores_gemma":[0.00002860297,0.001430819,0.827107,0.00004545187,0.00008879639,0.0005255353,0.002636455,0.07688212,0.08605043,0.0005972095,0.004526593,0.00008100084],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943253,0.00006354693,0.003098841,0.00006131388,0.000009674462,0.00005564705,0.0006694342,0.000159446,0.001556714],"genre_scores_gemma":[0.9965891,0.00004294872,0.002499391,0.00001288075,0.000004026919,0.00002027263,0.0004058301,0.000006572727,0.0004190649],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01254994,"threshold_uncertainty_score":0.02495378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0554295632708742,"score_gpt":0.3012221301386098,"score_spread":0.2457925668677356,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}