{"id":"W4296777855","doi":"10.1089/phage.2022.0003","title":"Genomic Profiling of Non-O157 Shiga Toxigenic <i>Escherichia coli</i> -Infecting Bacteriophages from South Africa","year":2022,"lang":"en","type":"article","venue":"PHAGE","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Science Centre for Human and Animal Health; Public Health Agency of Canada; Agriculture and Agri-Food Canada; University of Lethbridge; University of Calgary","funders":"","keywords":"Biology; Escherichia coli; Lysogenic cycle; Genomics; Microbiology; Genome; Bacteriophage; GenBank; Antibiotic resistance; Shiga toxin; Genetics; Gene; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001130069,0.0003823324,0.0002144806,0.0008825597,0.0003161574,0.0005031934,0.0001132325,0.0002637669,0.000771723],"category_scores_gemma":[0.0003726702,0.0001289062,0.0002206564,0.0008587734,0.0002237664,0.0002001004,0.0002499533,0.0002470814,0.0002284256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001807664,"about_ca_system_score_gemma":0.0002558812,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002531535,"about_ca_topic_score_gemma":0.003399803,"domain_scores_codex":[0.9998907,0.000008912487,0.000006693701,0.00003717878,0.00002548285,0.00003102995],"domain_scores_gemma":[0.9997868,0.00005192991,0.0000713353,0.000008499506,0.0000484616,0.00003292111],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002171361,0.000037738,0.02790835,0.0001637286,0.00001709903,0.0002310831,0.0005932201,0.00007717178,0.9675764,0.00002539488,0.00004846265,0.003104215],"study_design_scores_gemma":[0.00002108743,0.0006731667,0.7996627,0.0001078902,0.00009868122,0.00169506,0.003649277,0.0006132234,0.1887238,0.00008634465,0.004646419,0.00002233547],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982564,0.0002297701,0.0003196656,0.00002056681,0.000003244155,0.00001923328,0.000860927,0.000005367384,0.000284871],"genre_scores_gemma":[0.993264,0.0006672971,0.002146437,0.00005909363,0.000006364965,0.00003723368,0.002946303,0.00001304608,0.0008602608],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002531535,"threshold_uncertainty_score":0.005033612,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01196503402768317,"score_gpt":0.2201035263019329,"score_spread":0.2081384922742498,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}