{"id":"W4297009632","doi":"10.1021/acsomega.2c03711","title":"Evaluation of Azido 3-Deoxy-<scp>d</scp>-<i>manno</i>-oct-2-ulosonic Acid (Kdo) Analogues for Click Chemistry-Mediated Metabolic Labeling of <i>Myxococcus xanthus</i> DZ2 Lipopolysaccharide","year":2022,"lang":"en","type":"article","venue":"ACS Omega","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; Université Laval; PROTEO; Université du Québec à Chicoutimi; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Institut national de la recherche scientifique; Réseau Québécois de Recherche sur les Médicaments; Fonds de recherche du Québec – Nature et technologies; Université Laval; Armand-Frappier Foundation; Université de Namur; Banting Research Foundation; Université du Québec à Chicoutimi","keywords":"Myxococcus xanthus; Click chemistry; Chemistry; Bacteria; Biochemistry; Cycloaddition; Lipopolysaccharide; Stereochemistry; Bacterial outer membrane; Escherichia coli; Biology; Combinatorial chemistry; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001265555,0.0002385605,0.0004090991,0.0000828428,0.0002736983,0.00002879409,0.0005153868,0.00009594153,0.0007484912],"category_scores_gemma":[0.0005186755,0.0002512558,0.0002230524,0.0005119292,0.0001577414,0.0003134176,0.0004024108,0.0002731501,0.00006138291],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002493389,"about_ca_system_score_gemma":0.00009203136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007427601,"about_ca_topic_score_gemma":0.0002258952,"domain_scores_codex":[0.997645,0.0001423745,0.0006355509,0.0004571906,0.0006941583,0.0004257394],"domain_scores_gemma":[0.9985097,0.0002459842,0.0005403996,0.0004664657,0.0001344741,0.0001029702],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001751162,0.0002451835,0.0004760928,0.00002895178,0.0001254356,7.332778e-7,0.0005767256,0.0008396513,0.9930667,0.00002616236,0.002257188,0.002339718],"study_design_scores_gemma":[0.001168419,0.000144503,0.003048155,0.00002257298,0.0005650404,0.0000161096,0.000732068,0.001338496,0.9535509,0.0002620977,0.03898561,0.0001660831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958168,0.0008610104,0.000061617,0.0001147899,0.0003917183,0.0006241343,0.0007376221,0.00004747664,0.001344879],"genre_scores_gemma":[0.9979021,0.000171913,0.0004866033,0.0001658302,0.00008116513,0.0002205859,0.000287318,0.00003862237,0.0006458962],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0395158,"threshold_uncertainty_score":0.999994,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02127755363017558,"score_gpt":0.2655231353154484,"score_spread":0.2442455816852728,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}