{"id":"W4297236318","doi":"10.1101/2022.09.23.509114","title":"In host evolution of <i>Exophiala dermatitidis</i> in cystic fibrosis lung micro-environment","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of California, Riverside; Canadian Institute for Advanced Research; National Institutes of Health; Cystic Fibrosis Foundation; National Science Foundation","keywords":"Biology; Population; Genetics; Microbiology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002270406,0.0002464912,0.0002291735,0.000509222,0.0003338385,0.0005319422,0.0002046831,0.0004889453,0.00133823],"category_scores_gemma":[0.0003518313,0.0001486711,0.0002066121,0.0003973146,0.0002080124,0.0002800475,0.000370421,0.0004503628,0.0002480214],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002875041,"about_ca_system_score_gemma":0.0001394287,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001920318,"about_ca_topic_score_gemma":0.002488155,"domain_scores_codex":[0.9997155,0.0000444278,0.00001686656,0.0001100243,0.00003782528,0.00007536897],"domain_scores_gemma":[0.9997682,0.00004598597,0.00008991302,0.00001573257,0.00003441242,0.00004573623],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005079012,0.0001457129,0.272572,0.00007077444,0.00007958409,0.0007271589,0.0004969288,0.0002925607,0.7182067,0.0002055097,0.0002175085,0.006477719],"study_design_scores_gemma":[0.000005766084,0.0001786771,0.9860424,0.00001250349,0.00002565224,0.00164839,0.0006339534,0.0006898675,0.009868928,0.00006839195,0.000812205,0.00001321763],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992084,0.0001054618,0.0001503282,0.00002646214,0.000002015611,0.000005573374,0.0001700082,0.000006343783,0.0003254203],"genre_scores_gemma":[0.9994107,0.00004536227,0.000174046,0.00002686334,0.000002570097,0.000003675015,0.0001809811,0.000004898298,0.0001508875],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001920318,"threshold_uncertainty_score":0.004476845,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00760838351355101,"score_gpt":0.2201345688574139,"score_spread":0.2125261853438629,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}