{"id":"W4297347330","doi":"10.1101/2022.09.24.22280288","title":"Circulating Proteome for Pulmonary Nodule Malignancy","year":2022,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; BC Cancer Agency; Public Health Ontario; University of Toronto; Sinai Health System; Lunenfeld-Tanenbaum Research Institute","funders":"European Regional Development Fund; Instituto de Salud Carlos III; National Institutes of Health","keywords":"Malignancy; Lung cancer; Pathology; Nodule (geology); Medicine; Logistic regression; Biology; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008405729,0.0003369533,0.0003944602,0.0009758255,0.0002992504,0.0009597597,0.0002298851,0.000404349,0.0011517],"category_scores_gemma":[0.001825007,0.0001710687,0.000399942,0.0009601479,0.0002769156,0.0003047478,0.0004101627,0.0004079453,0.0002467414],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004431813,"about_ca_system_score_gemma":0.0004345444,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001733328,"about_ca_topic_score_gemma":0.001559098,"domain_scores_codex":[0.9996852,0.00008276069,0.00002615044,0.0001064685,0.00006300089,0.00003646567],"domain_scores_gemma":[0.9989381,0.0003315009,0.0004484236,0.00006104242,0.0001420457,0.00007879853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001023798,0.00008357975,0.8923225,0.00031149,0.0003658773,0.0003941555,0.0001272782,0.002219078,0.08132169,0.0003243489,0.000661455,0.02084468],"study_design_scores_gemma":[0.00002992796,0.0002802986,0.9568312,0.00006142166,0.0004199502,0.001338184,0.0001459257,0.01502234,0.02269528,0.001355776,0.001798935,0.00002093457],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913599,0.00358886,0.003157808,0.0001614696,0.0000164676,0.00002151241,0.001135462,0.00005887172,0.0004997772],"genre_scores_gemma":[0.997142,0.0003397322,0.001787785,0.00004233122,0.00001169879,0.00001025049,0.0005313616,0.000004867239,0.0001300077],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001733328,"threshold_uncertainty_score":0.004445434,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03714607182631633,"score_gpt":0.3198084934910048,"score_spread":0.2826624216646884,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}