{"id":"W4297491644","doi":"10.1186/s12014-022-09371-z","title":"The dynamic changes and sex differences of 147 immune-related proteins during acute COVID-19 in 580 individuals","year":2022,"lang":"en","type":"article","venue":"Clinical Proteomics","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill Genome Centre; Université de Montréal; McGill University Health Centre; Centre Hospitalier de l’Université de Montréal; McGill University; Jewish General Hospital","funders":"Fonds de Recherche du Québec - Santé; Génome Québec; Public Health Agency of Canada; McGill University; Fondation de l'Hôpital général juif; Canadian Institutes of Health Research; Compute Canada; National Institutes of Health; Japan Society for the Promotion of Science; Cancer Research UK; TD Bank; Jewish General Hospital; Public Health Agency; National Cancer Institute; amfAR, The Foundation for AIDS Research","keywords":"Coronavirus disease 2019 (COVID-19); Proteomics; Immune system; 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Immunology; Pandemic; Biology; Computational biology; Bioinformatics; Virology; Internal medicine; Disease; Genetics; Outbreak; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00563642,0.000221928,0.0009172714,0.0001632357,0.0005648623,0.00002794865,0.0004891634,0.0001759471,0.00006939821],"category_scores_gemma":[0.0417841,0.0001542344,0.0001998229,0.0004736231,0.00125419,0.00004100562,0.001806863,0.001721342,0.000003571751],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002931501,"about_ca_system_score_gemma":0.0007235389,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001438743,"about_ca_topic_score_gemma":0.00009676976,"domain_scores_codex":[0.9959074,0.0008210241,0.001485528,0.0005930518,0.0006803724,0.0005126438],"domain_scores_gemma":[0.9885045,0.009983996,0.0004949265,0.0006154731,0.00007097246,0.0003301033],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002237711,0.001270583,0.9664948,0.00120842,0.00110186,0.000193813,0.002231584,0.00008699863,0.006624973,0.0003077812,0.00007401187,0.01816746],"study_design_scores_gemma":[0.01118076,0.004519226,0.9645075,0.0002435196,0.0002489788,0.0000190292,0.001319265,0.005354996,0.0005945548,0.008413332,0.003148884,0.0004499548],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9653355,0.000685073,0.00004420056,0.03026118,0.0001264406,0.003371167,0.00008301371,0.00005570495,0.00003767051],"genre_scores_gemma":[0.9924423,0.004364773,0.0002574277,0.0008021993,0.00004484923,0.0008746813,0.00001301384,0.00002779837,0.00117294],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03614768,"threshold_uncertainty_score":0.9662874,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06152676264727978,"score_gpt":0.4348672027069265,"score_spread":0.3733404400596467,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}