{"id":"W4297983586","doi":"10.1371/journal.ppat.1010888","title":"Complex and simple translational readthrough signals in pea enation mosaic virus 1 and potato leafroll virus, respectively","year":2022,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; Iowa State University","keywords":"Biology; Subgenomic mRNA; Potato leafroll virus; RNA; Virology; Capsid; Genetics; Virus; Translation (biology); Plant virus; Gene; Messenger RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003244514,0.0001216438,0.0001877132,0.00003623101,0.000501322,0.00003971819,0.0001068692,0.00003143915,0.0005268076],"category_scores_gemma":[0.00009127847,0.00006194106,0.00003072631,0.0003211805,0.00008404584,0.0001115253,0.0001443779,0.0001622734,0.000005653708],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004080182,"about_ca_system_score_gemma":0.00001051004,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005396931,"about_ca_topic_score_gemma":0.002938216,"domain_scores_codex":[0.9985486,0.0002559648,0.0001853271,0.0003428419,0.0004029679,0.0002642517],"domain_scores_gemma":[0.9993724,0.0004373675,0.00005049424,0.00003241477,0.00004014781,0.00006713031],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001026874,0.0001227922,0.00723661,0.000005392572,0.00001933324,0.00002674214,0.0006330961,0.00003353772,0.9868168,0.0001034521,0.0008447871,0.004054747],"study_design_scores_gemma":[0.0007029414,0.0006514288,0.932712,0.00001366144,0.00002487997,0.00003009676,0.001741816,0.003413638,0.01252791,0.006100345,0.04161956,0.0004616839],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9890121,0.0005820172,0.000001694866,0.001262985,0.000009431468,0.0003044979,0.008483483,0.00003283374,0.0003109662],"genre_scores_gemma":[0.9986669,0.0003627942,0.00007326371,0.0001886541,0.00005235733,0.00007818775,0.0005278708,0.000001498872,0.00004848906],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9742889,"threshold_uncertainty_score":0.5768173,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.079268096435416,"score_gpt":0.2763884338380735,"score_spread":0.1971203374026576,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}