{"id":"W4298442602","doi":"10.7554/elife.75804.sa2","title":"Author response: Exploring the expression patterns of palmitoylating and de-palmitoylating enzymes in the mouse brain using the curated RNA-seq database BrainPalmSeq","year":2022,"lang":"en","type":"peer-review","venue":"","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"RNA-Seq; Database; Computational biology; Expression (computer science); Enzyme; RNA; Biology; Computer science; Gene expression; Transcriptome; Genetics; Biochemistry; Gene; Programming language","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00381034,0.000727764,0.0008278291,0.001163545,0.001406905,0.001945185,0.000824864,0.003153495,0.2288559],"category_scores_gemma":[0.02298038,0.0003587784,0.0006713981,0.0008373991,0.0007234776,0.001040955,0.00215795,0.002512852,0.08510721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001157504,"about_ca_system_score_gemma":0.005532756,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006367682,"about_ca_topic_score_gemma":0.02181375,"domain_scores_codex":[0.997762,0.0004003283,0.0001466188,0.0002761103,0.001145957,0.0002689336],"domain_scores_gemma":[0.9818529,0.003359137,0.0006659342,0.0006142142,0.01140098,0.002106686],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008613586,0.00000597389,0.0003544347,0.0001669544,0.000007725025,0.00007779924,0.00005188337,0.00006293762,0.0007974699,0.000278255,0.9924282,0.005682125],"study_design_scores_gemma":[0.00006675535,0.00003597477,0.002080606,0.0001891513,0.00001727778,0.000145849,0.0003985699,0.0001943002,0.001582209,0.0008303992,0.9944159,0.00004306425],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.009130408,0.002726737,0.009495258,0.5301506,0.2721249,0.0009038863,0.06617492,0.008323069,0.1009703],"genre_scores_gemma":[0.02490141,0.003695371,0.008651829,0.1372631,0.02417651,0.0008802259,0.0276792,0.00419221,0.76856],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.2288559,"threshold_uncertainty_score":0.7655994,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1437969381505804,"score_gpt":0.3773495901891566,"score_spread":0.2335526520385762,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}