{"id":"W4299933975","doi":"10.17615/thcx-v290","title":"Genome-Wide Identification of Francisella tularensis Virulence Determinants","year":2020,"lang":"en","type":"article","venue":"UNC Libraries","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Food and Drug Administration; Turun Yliopisto; National Institutes of Health; Umeå Universitet; University of Victoria; University of Rochester","keywords":"Francisella tularensis; Virulence; Identification (biology); Genome; Biology; Tularemia; Francisella; Virology; Microbiology; Computational biology; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001448787,0.0001877656,0.000186178,0.0004112982,0.0001341313,0.0001735019,0.0001269734,0.000268594,0.0004630551],"category_scores_gemma":[0.0002343299,0.0000885575,0.0001589518,0.0003060828,0.00008937481,0.00007424037,0.0001640082,0.0002587287,0.0001539446],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001106977,"about_ca_system_score_gemma":0.000166344,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001209071,"about_ca_topic_score_gemma":0.001988205,"domain_scores_codex":[0.9999254,0.000006924255,0.000004627229,0.00001955112,0.0000250519,0.00001849736],"domain_scores_gemma":[0.9998746,0.00003558772,0.00003152519,0.000007395233,0.00002475476,0.00002612994],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001631022,0.00002962987,0.007115275,0.00004142636,0.00001847676,0.00009089203,0.00005975735,0.00008635674,0.9876859,0.00003769755,0.00007721098,0.004594234],"study_design_scores_gemma":[0.00004178094,0.0006919988,0.6397933,0.00004824892,0.0002436334,0.001842748,0.0003819558,0.00262204,0.3468642,0.0001556942,0.007284473,0.0000300095],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971882,0.0005680671,0.00119447,0.00003706107,0.000004510499,0.00001393023,0.0006596902,0.00002510494,0.0003089078],"genre_scores_gemma":[0.9933485,0.0004797176,0.002171534,0.0000478449,0.000005498174,0.00001475609,0.003195741,0.00001262123,0.0007239176],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001209071,"threshold_uncertainty_score":0.002404094,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01727326631689901,"score_gpt":0.2343096188145241,"score_spread":0.2170363524976251,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}