{"id":"W4300415526","doi":"10.32942/osf.io/s5rd7","title":"Genomic architecture of resistance and tolerance to Swiss needle cast and Rhabdocline needle cast diseases in Douglas-fir","year":2022,"lang":"en","type":"preprint","venue":"","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Alberta; Alberta Innovates Bio Solutions; Genome British Columbia; University of Alberta; Alberta Innovates; Génome Québec; Compute Canada; Genome Canada","keywords":"Genome-wide association study; Biology; Douglas fir; Genetic architecture; Single-nucleotide polymorphism; Jasmonic acid; Gene; Candidate gene; Plant disease resistance; Resistance (ecology); Genetics; Botany; Quantitative trait locus; Genotype; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000199234,0.0002283277,0.0001627493,0.0006088812,0.0001801781,0.0002382088,0.0001217835,0.0003073463,0.001102621],"category_scores_gemma":[0.000227465,0.0001527048,0.0002932982,0.0003771555,0.0002302036,0.00007562147,0.0002163226,0.0002093269,0.0001582581],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000187113,"about_ca_system_score_gemma":0.0001473035,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00393422,"about_ca_topic_score_gemma":0.006609204,"domain_scores_codex":[0.9998026,0.00002504214,0.00001060678,0.0001040651,0.00002465994,0.00003297791],"domain_scores_gemma":[0.999667,0.00007880559,0.0001384228,0.00002652529,0.00001919917,0.00006998127],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007797622,0.00007820578,0.3248937,0.00008140728,0.0002036699,0.0005564024,0.0006218745,0.0004121767,0.6661655,0.0002779966,0.0001029257,0.005826392],"study_design_scores_gemma":[0.000006433514,0.00004579046,0.9975611,0.00000373879,0.00002809953,0.0002715964,0.0000702583,0.0001879003,0.001603558,0.000041738,0.0001768537,0.000002946098],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994045,0.00007147463,0.0001807685,0.000009298559,0.000001320514,0.000001659581,0.0001871047,0.000004393573,0.0001393547],"genre_scores_gemma":[0.9990215,0.00004542342,0.0002034089,0.00001607721,0.000002242956,0.000002391619,0.0003852744,0.000003721043,0.0003199406],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00393422,"threshold_uncertainty_score":0.007822692,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008067974372277594,"score_gpt":0.235474957649436,"score_spread":0.2274069832771584,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}