{"id":"W4300487027","doi":"10.17615/hbs6-2j37","title":"Cryptococcus gattii VGIII Isolates Causing Infections in HIV/AIDS Patients in Southern California: Identification of the Local Environmental Source as Arboreal","year":2020,"lang":"en","type":"article","venue":"UNC Libraries","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Kaiser Permanente; Nova Southeastern University; National Institute of Allergy and Infectious Diseases; Johns Hopkins University; Centers for Disease Control and Prevention; North Carolina State University; National Institutes of Health","keywords":"Cryptococcus gattii; Arboreal locomotion; Identification (biology); Cryptococcus; Human immunodeficiency virus (HIV); Cryptococcosis; Biology; Virology; Ecology; Microbiology; Habitat","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001132891,0.0002517817,0.0001534289,0.0005605077,0.0006522459,0.000423868,0.0001485073,0.0002156114,0.0005759702],"category_scores_gemma":[0.0002892356,0.0001651687,0.000118252,0.0005897825,0.0002170153,0.0001176036,0.0002041486,0.0002746277,0.0000762237],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003053251,"about_ca_system_score_gemma":0.0003902635,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04092916,"about_ca_topic_score_gemma":0.06520064,"domain_scores_codex":[0.9998932,0.000008408544,0.00001564654,0.0000334423,0.00002649036,0.00002287241],"domain_scores_gemma":[0.9997274,0.00003650757,0.0001001127,0.00001345587,0.0000453263,0.00007715265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002656526,0.00004577189,0.970257,0.00008996346,0.00003181554,0.002005882,0.0009783726,0.0001318821,0.01745358,0.0000188235,0.0002494166,0.0084719],"study_design_scores_gemma":[0.00001233852,0.0001140506,0.9912152,0.00003114686,0.00004683798,0.004333479,0.001315158,0.0001874241,0.002060137,0.00001499535,0.0006612283,0.00000792011],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993491,0.0001455392,0.00004359304,0.00001277209,0.000001758667,0.00000766765,0.0001354389,0.000003622888,0.0003004136],"genre_scores_gemma":[0.9993951,0.0001363806,0.0001697077,0.00001576095,0.000003250056,0.00000270721,0.0001837471,0.000001497198,0.00009182971],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04092916,"threshold_uncertainty_score":0.08138186,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008427393118250125,"score_gpt":0.2041282584394764,"score_spread":0.1957008653212263,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}