{"id":"W4300948628","doi":"10.17615/aj16-5x95","title":"A novel lung disease phenotype adjusted for mortality attrition for cystic fibrosis Genetic modifier studies","year":2020,"lang":"en","type":"article","venue":"UNC Libraries","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Penn State Health Children's Hospital; Feinberg School of Medicine; College of Medicine, Drexel University; University of North Carolina at Chapel Hill; School of Medicine, Emory University; Claude Pepper Older Americans Independence Center, Wake Forest School of Medicine; Hospital for Sick Children; University of Alberta; Ontario Genomics Institute; Connecticut Children's Medical Center; Ontario Genomics; National Heart, Lung, and Blood Institute; Saint Louis University; University of South Florida; Pennsylvania State University; Dartmouth College; IWK Health Centre; Drexel University; College of Engineering, Michigan State University; Johns Hopkins University; Genome Canada; University of Nebraska Medical Center; Kaiser Permanente; State University of New York; Case Western Reserve University; University of Minnesota; Yale University; Bunning Food Allergy Institute, Ann and Robert H. Lurie Children's Hospital of Chicago; Children's Hospital of Philadelphia; Wake Forest University; University of Pennsylvania; University of Missouri; Northwestern University; University of Rochester; Ontario Research Foundation; Flight Attendant Medical Research Institute; Michigan State University; Emory University; Cincinnati Children's Hospital Medical Center; University of Pittsburgh; Syracuse University; Children's Hospital of Michigan; University of Southern California; University of Cincinnati; University of California, San Francisco; Nationwide Children's Hospital","keywords":"Cystic fibrosis; Attrition; Lung disease; Phenotype; Disease; Medicine; Lung; Pathology; Internal medicine; Bioinformatics; Biology; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009211098,0.0002361413,0.0004839615,0.00007235118,0.0001973493,0.00008867348,0.0001408593,0.00006181315,0.00004752322],"category_scores_gemma":[0.004479517,0.000201708,0.0001917412,0.0002800137,0.000281036,0.0003838239,0.0001076745,0.0001023739,0.00000738573],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005944576,"about_ca_system_score_gemma":0.0002813762,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001066225,"about_ca_topic_score_gemma":0.000005049503,"domain_scores_codex":[0.9982989,0.00003012664,0.0003678952,0.0004882744,0.0003817476,0.0004330209],"domain_scores_gemma":[0.9981038,0.0007706793,0.00008893751,0.0002945874,0.0002998254,0.0004422019],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.07046374,0.002842469,0.0655752,0.09367681,0.00655487,0.0001432304,0.009262468,0.00515605,0.2405624,0.1850122,0.2978091,0.02294151],"study_design_scores_gemma":[0.02866207,0.005191817,0.3849967,0.002215219,0.004943432,0.00001286536,0.003373871,0.3829144,0.01817698,0.1252823,0.04221665,0.002013705],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1999453,0.05493303,0.7060623,0.02378307,0.0005736449,0.009674054,0.004192626,0.0007174017,0.0001185361],"genre_scores_gemma":[0.637993,0.00005832234,0.3562203,0.001665056,0.001131868,0.001625198,0.0005925416,0.0001059073,0.0006077563],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.4380477,"threshold_uncertainty_score":0.8225411,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1258142025627212,"score_gpt":0.3552870604180727,"score_spread":0.2294728578553515,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}