{"id":"W4301461972","doi":"10.21203/rs.3.rs-1674482/v1","title":"Increased genital mucosal cytokines in Canadian women associates with increased antigen presenting cells, inflammatory metabolites, epithelial barrier disruption and the depletion of L. crispatus","year":2022,"lang":"en","type":"preprint","venue":"Research Square","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Sciences Centre; Public Health Agency of Canada; University of Manitoba","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada; Case Western Reserve University","keywords":"Inflammation; Biology; Immunology; Chemokine; Metabolome; Immune system; Microbiome; Bioinformatics; Metabolomics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002524179,0.0004156485,0.0003835049,0.001015324,0.001597707,0.0007392643,0.0004058027,0.0003872763,0.002017258],"category_scores_gemma":[0.0006331137,0.0002277671,0.0003836685,0.001476806,0.0004481537,0.0001130296,0.000401621,0.0003986214,0.0001609738],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004270888,"about_ca_system_score_gemma":0.004429045,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8044335,"about_ca_topic_score_gemma":0.8407189,"domain_scores_codex":[0.9996823,0.00001841892,0.00001241405,0.00006870308,0.0001342671,0.00008387124],"domain_scores_gemma":[0.9997506,0.00001887911,0.00006962708,0.00001226907,0.0001016262,0.00004703644],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008864951,0.00007768508,0.9360965,0.0002458266,0.000216208,0.0006799579,0.0008485917,0.0002029438,0.04455031,0.0001010198,0.001013188,0.01508129],"study_design_scores_gemma":[0.00000471188,0.00005629606,0.9959877,0.00002214715,0.00006193913,0.0004017066,0.0005742923,0.0002250996,0.001583693,0.00002553691,0.001048032,0.000008824494],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944732,0.001289191,0.0002465862,0.0001894647,0.00001012828,0.00003735118,0.002569582,0.00001401412,0.001170611],"genre_scores_gemma":[0.9966795,0.0004662643,0.0005832919,0.0001154226,0.000003717574,0.00001340344,0.001007202,0.00000401161,0.001127278],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1955665,"threshold_uncertainty_score":0.3934364,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01538304461412212,"score_gpt":0.3015765563799761,"score_spread":0.286193511765854,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}