{"id":"W4302027591","doi":"10.1073/pnas.2209589119","title":"Stunted children display ectopic small intestinal colonization by oral bacteria, which cause lipid malabsorption in experimental models","year":2022,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Child Nutrition and Water Access","field":"Nursing","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Université de Nantes; Université de Lausanne; Nutricia Research Foundation; Total Foundation; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Canadian Institute for Advanced Research; Bill and Melinda Gates Foundation; Universität Basel; Assistance publique-Hôpitaux de Paris; Howard Hughes Medical Institute; National Science Foundation","keywords":"Malabsorption; Dysbiosis; Biology; Intestinal permeability; Feces; Calprotectin; Microbiological culture; Small intestine; Small intestinal bacterial overgrowth; Gastroenterology; Context (archaeology); Microbiology; Internal medicine; Gut flora; Immunology; Bacteria; Medicine; Inflammatory bowel disease; Irritable bowel syndrome; Endocrinology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003284928,0.0007259709,0.0006797875,0.0009912178,0.0003510239,0.0004641668,0.0002859563,0.0004933,0.001783036],"category_scores_gemma":[0.0003812418,0.0003456135,0.0005300415,0.0007260111,0.0005849216,0.0005205421,0.0006123086,0.001038241,0.0003912243],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002835842,"about_ca_system_score_gemma":0.0003200929,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009484089,"about_ca_topic_score_gemma":0.001623877,"domain_scores_codex":[0.9994351,0.00009821813,0.00005354122,0.0001454877,0.0001368248,0.0001309357],"domain_scores_gemma":[0.999492,0.00005381107,0.0002015364,0.00006816605,0.00004328933,0.0001412412],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002471762,0.0008223008,0.0396922,0.000373907,0.00008908129,0.001877433,0.0003895325,0.0001493038,0.9456519,0.0002326173,0.00025606,0.007993904],"study_design_scores_gemma":[0.0001071855,0.01182823,0.5632612,0.0001783498,0.0002001996,0.01074025,0.002011322,0.001192955,0.4051866,0.0003283159,0.004918326,0.00004706087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957141,0.001583335,0.001308376,0.00005954299,0.00002738636,0.00004734666,0.0005533562,0.0000369561,0.0006694678],"genre_scores_gemma":[0.9929835,0.002223769,0.002239829,0.0001142121,0.0000150415,0.0001168518,0.0009992801,0.00001851862,0.001288972],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001783036,"threshold_uncertainty_score":0.005964875,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04009871594055203,"score_gpt":0.300621803688888,"score_spread":0.260523087748336,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}