{"id":"W4302336663","doi":"10.17615/ndzd-wt90","title":"Common variants at 12p11, 12q24, 9p21, 9q31.2 and in ZNF365 are associated with breast cancer risk for BRCA1 and/or BRCA2mutation carriers","year":2020,"lang":"en","type":"article","venue":"UNC Libraries","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"European Social Fund; National Cancer Institute; State Education Development Agency Republic of Latvia; National Health and Medical Research Council; Canadian Institutes of Health Research; Cancer Center, University of Kansas; National Institutes of Health; University of Pennsylvania; Institut Català de la Salut; Royal Marsden NHS Foundation Trust; Umeå Universitet; Istituto Oncologico Veneto; Leids Universitair Medisch Centrum; Georgetown University; Centre Hospitalier Universitaire de Québec; Landspítali Háskólasjúkrahús; Ministero dell’Istruzione, dell’Università e della Ricerca; Lunds Universitet; Ministero della Salute; Radboud Universitair Medisch Centrum; Norway Grants; Generalitat de Catalunya; Sahlgrenska Universitetssjukhuset; Erasmus Medisch Centrum; Vrije Universiteit Amsterdam; ZonMw; Division of Cancer Epidemiology and Genetics, National Cancer Institute; Huntsman Cancer Institute; Cancer Australia; National Breast Cancer Foundation; National Institute for Health and Care Research; Linköpings Universitet; Women's College Research Institute; Canadian Breast Cancer Research Alliance; Universitair Medisch Centrum Groningen; Universiteit Leiden; Deutsches Krebsforschungszentrum; KWF Kankerbestrijding; Beckman Research Institute, City of Hope; Cancer Research UK; American Cancer Society; Instituto de Salud Carlos III; Ohio State University; Radboud Universiteit; Kansas Bioscience Authority; Cancer Association of South Africa; Akademiska Sjukhuset; Cancer Care Ontario; Breast Cancer Research Foundation; Hungarian Scientific Research Fund; Cedars-Sinai Medical Center; Helsingin ja Uudenmaan Sairaanhoitopiiri; Fox Chase Cancer Center; Medical Research Council; Uppsala Universitet; Memorial Sloan-Kettering Cancer Center","keywords":"Breast cancer; Cancer; Oncology; Medicine; Internal medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000593814,0.0001400067,0.0001773278,0.0000226928,0.0001643185,0.00008395074,0.0000703328,0.0001138442,0.00002896194],"category_scores_gemma":[0.00006666587,0.0001131883,0.00002258599,0.00008111536,0.00009873071,0.00002737643,0.00009055,0.0000581665,3.903304e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002139871,"about_ca_system_score_gemma":0.0001081711,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001870486,"about_ca_topic_score_gemma":0.001757382,"domain_scores_codex":[0.9992822,0.00005026043,0.0001574157,0.000265335,0.00006647347,0.0001783088],"domain_scores_gemma":[0.9996153,0.00003917572,0.0001285586,0.00008940972,0.00004132095,0.00008621583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002043949,0.00005522387,0.9830668,0.0001325628,0.0003138575,0.00001100863,0.003434489,0.0004889611,0.005695161,0.001581446,0.002213257,0.0009632596],"study_design_scores_gemma":[0.004909731,0.0006758773,0.9629207,0.0001145837,0.0001755819,0.00003827809,0.00383163,0.001717171,0.01855658,0.002218921,0.004184464,0.0006565247],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961071,0.0006280022,0.0001861117,0.001453105,0.00003797454,0.0002318671,0.001246464,0.00001706393,0.00009229495],"genre_scores_gemma":[0.9980437,0.00009643481,0.000525078,0.000512604,0.00008974558,0.0000536847,0.0002810725,0.00002139255,0.0003762848],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02014617,"threshold_uncertainty_score":0.4615684,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01039368016332291,"score_gpt":0.2059481342593802,"score_spread":0.1955544540960573,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}