{"id":"W4303453549","doi":"10.1073/pnas.2202261119","title":"Viruses direct carbon cycling in lake sediments under global change","year":2022,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"Laurentian University","funders":"Natural Environment Research Council; Sight Research UK","keywords":"Carbon cycle; Metagenomics; Dissolved organic carbon; Archaea; Ecology; Biology; Cycling; Carbon fibers; Microbial population biology; Organic matter; Environmental chemistry; Greenhouse gas; Environmental science; Nutrient cycle; Climate change; Microbial loop; Ecosystem; Food web; Bacteria; Chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005283994,0.00005706461,0.00007955424,0.00004474441,0.0001827829,0.00001138569,0.0004598473,0.00002271943,0.0002793802],"category_scores_gemma":[0.00003906004,0.00004423073,0.00003878804,0.000717072,0.000285317,0.0003127574,0.0004207439,0.0001159433,0.00000181094],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001556366,"about_ca_system_score_gemma":0.000005843068,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000279103,"about_ca_topic_score_gemma":0.00001427966,"domain_scores_codex":[0.9989457,0.000007278546,0.0001777529,0.0001752307,0.0005718659,0.0001222126],"domain_scores_gemma":[0.9997569,0.0000252297,0.0001849795,0.000004983651,0.00001040868,0.00001744173],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001731777,0.0001645968,0.1995334,0.000009887805,0.000008537142,1.652396e-8,0.0003949497,0.001140739,0.7965474,0.001335499,0.0003875021,0.0004601904],"study_design_scores_gemma":[0.0001382356,0.00003981899,0.9524425,0.00002571525,0.00000620485,0.000007916693,0.0003032531,0.0006408062,0.03973747,0.004367008,0.002204721,0.0000863235],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9716958,0.00002611179,2.813682e-8,0.001197151,0.00004659935,0.0001178183,0.00004239997,0.000005802984,0.02686826],"genre_scores_gemma":[0.9989722,0.000006629523,0.000107673,0.0007704014,0.00002510638,0.00002064319,9.757251e-8,0.000001925214,0.00009526161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7568099,"threshold_uncertainty_score":0.3059018,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06068380412259682,"score_gpt":0.3183755868624351,"score_spread":0.2576917827398382,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}