{"id":"W4303520787","doi":"10.1016/j.bbabio.2022.148928","title":"Photoactivation and conformational gating for manganese binding and oxidation in bacterial reaction centers","year":2022,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - Bioenergetics","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Concordia University","keywords":"Manganese; Chemistry; Photochemistry; Bacteriochlorophyll; Ion; Conformational change; Crystallography; Stereochemistry; Photosynthesis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002719106,0.0001362621,0.0001776894,0.00009287444,0.0004077224,0.0004513532,0.000461307,0.000343293,0.002254388],"category_scores_gemma":[0.0004558012,0.0001885567,0.000177339,0.0001055969,0.0005672154,0.0003836149,0.0003669408,0.0009551675,0.000210557],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008319309,"about_ca_system_score_gemma":0.0002829687,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001430543,"about_ca_topic_score_gemma":0.001799842,"domain_scores_codex":[0.9999034,0.00001096289,0.000003859537,0.00002028327,0.00002117759,0.00004033095],"domain_scores_gemma":[0.9998378,0.00007675055,0.00002014486,0.00001686319,0.0000131065,0.00003537527],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006715766,0.00008068385,0.000762415,0.00005302161,0.000008662435,0.0001311535,0.0001891962,0.0005879315,0.9905648,0.002994342,0.0001422064,0.00381407],"study_design_scores_gemma":[0.00008979659,0.0002486396,0.01676024,0.00002453138,0.00001491856,0.0003362364,0.0003601724,0.02355288,0.9554789,0.001641082,0.001448369,0.00004425301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975067,0.0001438772,0.001394268,0.000160161,0.00001462068,0.00000531345,0.00002105506,0.00002576082,0.0007283475],"genre_scores_gemma":[0.9991984,0.00007129121,0.0002260271,0.0000287324,0.000002636187,0.000004802957,0.00002946214,0.00001016432,0.0004285132],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002254388,"threshold_uncertainty_score":0.007541716,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0097140277763483,"score_gpt":0.2386004999752119,"score_spread":0.2288864721988636,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}