{"id":"W4304140085","doi":"10.1101/2022.10.09.511496","title":"Gut commensal <i>Enterocloster</i> species host inoviruses that are secreted <i>in vitro</i> and <i>in vivo</i>","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia","keywords":"Secretion; Biology; Microbiology; Prophage; Biofilm; In vivo; Bacteria; In vitro; Cell biology; Bacteriophage; Escherichia coli; Genetics; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002819091,0.000620331,0.000434875,0.0002727354,0.0001870337,0.0009496346,0.0001949577,0.0004572416,0.001395571],"category_scores_gemma":[0.0003861426,0.0002228573,0.0004805548,0.0002024085,0.0002743042,0.0003321353,0.0004434828,0.0005406448,0.0006386142],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002005298,"about_ca_system_score_gemma":0.0001809109,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007214634,"about_ca_topic_score_gemma":0.0008448964,"domain_scores_codex":[0.9995354,0.00006734,0.00003841993,0.0001255957,0.0001366865,0.00009666196],"domain_scores_gemma":[0.9996042,0.00009525779,0.0001214651,0.00004834884,0.00006930621,0.00006145344],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000332724,0.00001612203,0.001495173,0.00007127947,0.000008626351,0.00002567067,0.00001643974,0.0000335605,0.9975896,0.00002137145,0.00002408261,0.0006648649],"study_design_scores_gemma":[0.000005816034,0.0004367594,0.02374728,0.00004477063,0.00004340469,0.0003602356,0.0002457474,0.0007891114,0.9720656,0.00005388299,0.002189845,0.00001745289],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907901,0.001256508,0.004638682,0.00007883921,0.00005456571,0.00006496513,0.001040547,0.0001627256,0.001912937],"genre_scores_gemma":[0.9876741,0.0008195838,0.007054226,0.0002238572,0.00001828503,0.00007829157,0.002131103,0.00008262372,0.001917974],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001395571,"threshold_uncertainty_score":0.004668713,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01566145453364671,"score_gpt":0.2107169118857211,"score_spread":0.1950554573520744,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}